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SOLUTION NMR
Materials and Methods page
2LHR
  •   NMR Eperiment Details Hide
    Representative Model Choice Rationale
    lowest energy  
     
    Spectrometer Info
    Field Strength 800.0
    Manufacturer Bruker
    Model Avance
    Field Strength 600.0
    Manufacturer Bruker
    Model Avance
    Field Strength 500.0
    Manufacturer Bruker
    Model Avance
     
    Sample Conditions
    IDs solution ID:1 condition ID:1
    Sample Contents 1.1 mM [U-100% 15N] IsdH linker, 20 mM potassium phosphate, 50 mM potassium chloride, 100 uM AEBSF protease inhibitor, 0.01 % sodium azide, 7 % D2O, 93% H2O/7% D2O
    Solvent System 93% H2O/7% D2O
    Ionic Strength 140
    pH 6.0
    Pressure ambient
    Temperature 298
    IDs solution ID:2 condition ID:1
    Sample Contents 1.3 mM [U-100% 13C; U-100% 15N] IsdH linker, 20 mM potassium phosphate, 50 mM potassium chloride, 100 uM AEBSF protease inhibitor, 0.01 % sodium azide, 7 % D2O, 93% H2O/7% D2O
    Solvent System 93% H2O/7% D2O
    Ionic Strength 140
    pH 6.0
    Pressure ambient
    Temperature 298
    IDs solution ID:3 condition ID:1
    Sample Contents 1.3 mM [U-100% 13C; U-100% 15N] IsdH linker, 20 mM potassium phosphate, 50 mM potassium chloride, 100 uM AEBSF protease inhibitor, 0.01 % sodium azide, 100 % D2O, 100% D2O
    Solvent System 100% D2O
    Ionic Strength 140
    pH 6.0
    Pressure ambient
    Temperature 298
     
     
  •   NMR Refinement Information Hide
    Refinement
    Method simulated annealing
     
  •   NMR Ensemble Information Hide
    Ensemble
    Conformer Selection Criteria structures with the lowest energy
    Conformers Calculated Total Number 100
    Conformers Submitted Total Number 20
     
  •   NMR Experimental Information Hide
    Experiment
    IDs experiment ID:1 solution ID:1 conditons ID:1
    Type 2D 1H-15N HSQC
    IDs experiment ID:10 solution ID:2 conditons ID:1
    Type 3D HCCH-TOCSY
    IDs experiment ID:11 solution ID:1 conditons ID:1
    Type 3D 1H-15N TOCSY
    IDs experiment ID:12 solution ID:2 conditons ID:1
    Type 3D HCCH-COSY
    IDs experiment ID:13 solution ID:3 conditons ID:1
    Type 3D HCCH-TOCSY
    IDs experiment ID:14 solution ID:1 conditons ID:1
    Type 3D 1H-15N NOESY
    IDs experiment ID:15 solution ID:2 conditons ID:1
    Type 3D 1H-13C NOESY
    IDs experiment ID:16 solution ID:3 conditons ID:1
    Type 3D 1H-13C NOESY
    IDs experiment ID:17 solution ID:2 conditons ID:1
    Type 2D 1H-13C HSQC
    IDs experiment ID:18 solution ID:3 conditons ID:1
    Type 2D 1H-13C HSQC
    IDs experiment ID:19 solution ID:3 conditons ID:1
    Type 3D 1H-13C NOESY aromatic
    IDs experiment ID:2 solution ID:2 conditons ID:1
    Type 3D HNCACB
    IDs experiment ID:20 solution ID:3 conditons ID:1
    Type 2D CB(CGCD)HD
    IDs experiment ID:21 solution ID:3 conditons ID:1
    Type 2D CB(CGCD)HE
    IDs experiment ID:3 solution ID:2 conditons ID:1
    Type 3D CBCA(CO)NH
    IDs experiment ID:4 solution ID:2 conditons ID:1
    Type 3D HN(CA)CO
    IDs experiment ID:5 solution ID:2 conditons ID:1
    Type 3D HNCO
    IDs experiment ID:6 solution ID:2 conditons ID:1
    Type 3D CC(CO)NH
    IDs experiment ID:7 solution ID:2 conditons ID:1
    Type 3D HBHA(CO)NH
    IDs experiment ID:8 solution ID:1 conditons ID:1
    Type 3D HNHA
    IDs experiment ID:9 solution ID:1 conditons ID:1
    Type 3D HNHB
     
  •   Software and Computing Hide
    NMR Software
    Authors Keller
    Classification chemical shift assignment
    Software Name CARA
    Authors Bruker Biospin
    Classification collection
    Software Name xwinnmr
    Authors Cornilescu, Delaglio and Bax
    Classification geometry optimization
    Software Name TALOS
    Authors Laskowski and MacArthur
    Classification geometry optimization
    Software Name ProcheckNMR
    Authors Herrmann, Guntert and Wuthrich
    Classification chemical shift assignment
    Software Name UNIO
    Authors Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
    Classification processing
    Software Name NMRDraw
    Authors Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
    Classification processing
    Software Name NMRPipe
    Authors Schwieters, Kuszewski, Tjandra and Clore
    Classification refinement
    Software Name X-PLOR_NIH
    Authors Garrett
    Classification peak picking
    Software Name PIPP