SOLUTION NMR Experimental Data


Experimental Details
Sample Conditions
Sample Contents1.0 mM RNA (5'-R(*(PSU)P*CP*GP*GP*GP*CP*CP*(RSQ)P*AP*UP*AP*CP*CP*CP*CP*GP*A)-3')-1, 90% H2O/10% D2O
Solvent90% H2O/10% D2O
Ionic Strength20
pH6.8
Pressureambient
Temperature (K)298
Experiment(s):2D 1H-1H NOESY, 2D 1H-1H COSY, 2D 1H-1H TOCSY
Sample Contents1 mM RNA (5'-R(*(PSU)P*CP*GP*GP*GP*CP*CP*(RSQ)P*AP*UP*AP*CP*CP*CP*CP*GP*A)-3')-2, 100% D2O
Solvent100% D2O
Ionic Strength20
pH6.8
Pressureambient
Temperature (K)298
Experiment(s):2D 1H-1H NOESY, 2D DQF-COSY, 2D 1H-13C HSQC, 2D 1H-31P HETCOR
Spectrometer Information
Manufacturer Model Field Strength
Varian INOVA 600.0
Bruker Avance 500.0
NMR Refinement
Method simulated annealing
NMR Ensemble Information
Conformer Selection Criteria structures with the lowest energy
Conformers Calculated Total Number 100
Conformers Submitted Total Number 10
Representative Model Choice Rationale
1 lowest energy
Computation: NMR Software
# Classification Software Name Author
1 collection xwinnmr Bruker Biospin
2 collection TOPSPIN Bruker Biospin
3 data analysis NMRDraw Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
5 peak picking SPARKY Goddard
6 chemical shift assignment SPARKY Goddard
7 data analysis SPARKY Goddard
8 structure solution version: 1.21 CNS Brunger, Adams, Clore, Gros, Nilges and Read
9 data analysis Molmol Koradi, Billeter and Wuthrich
10 refinement version: 1.21 CNS Brunger, Adams, Clore, Gros, Nilges and Read