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An Information Portal to 105339 Biological Macromolecular Structures

SOLUTION NMR
Materials and Methods page
2K8V
  •   NMR Eperiment Details Hide
    Representative Model Choice Rationale
    closest to the average  
     
    Spectrometer Info
    Field Strength 800.0
    Manufacturer Varian
    Model INOVA
    Field Strength 600.0
    Manufacturer Varian
    Model INOVA
     
    Sample Conditions
    IDs solution ID:1 condition ID:1
    Sample Contents 0.7-1.5 mM [U-99% 15N] ERp18, 20 mM sodium phosphate, 100 % sodium chloride, 10 % D2O, 90% H2O/10% D2O
    Solvent System 90% H2O/10% D2O
    Ionic Strength 100
    pH 6.5
    Pressure ambient
    Temperature 298
    IDs solution ID:2 condition ID:1
    Sample Contents 1-1.5 mM [U-99% 13C; U-99% 15N] ERp18, 20 mM sodium phosphate, 100 % sodium chloride, 10 % D2O, 90% H2O/10% D2O
    Solvent System 90% H2O/10% D2O
    Ionic Strength 100
    pH 6.5
    Pressure ambient
    Temperature 298
    IDs solution ID:3 condition ID:1
    Sample Contents 0.7-1.5 mM [U-99% 13C; U-99% 15N] ERp18, 20 mM sodium phosphate, 100 % sodium chloride, 100 % D2O, 100% D2O
    Solvent System 100% D2O
    Ionic Strength 100
    pH 6.5
    Pressure ambient
    Temperature 298
    IDs solution ID:4 condition ID:1
    Sample Contents 0.7-1.5 mM [U-99% 13C; U-99% 15N] ERp18, 20 mM sodium phosphate, 100 % sodium chloride, 10 % D2O, 90% H2O/10% D2O
    Solvent System 90% H2O/10% D2O
    Ionic Strength 100
    pH 6.5
    Pressure ambient
    Temperature 298
     
     
  •   NMR Refinement Information Hide
    Refinement
    Method simulated annealing
     
  •   NMR Ensemble Information Hide
    Ensemble
    Conformer Selection Criteria structures with the lowest energy
    Conformers Calculated Total Number 100
    Conformers Submitted Total Number 40
     
  •   NMR Experimental Information Hide
    Experiment
    IDs experiment ID:1 solution ID:1 conditons ID:1
    Type 2D 1H-15N HSQC
    IDs experiment ID:10 solution ID:3 conditons ID:1
    Type 3D HCCH-TOCSY
    IDs experiment ID:11 solution ID:1 conditons ID:1
    Type 3D 1H-15N TOCSY
    IDs experiment ID:12 solution ID:1 conditons ID:1
    Type 3D 1H-15N NOESY
    IDs experiment ID:13 solution ID:2 conditons ID:1
    Type 3D 1H-13C NOESY
    IDs experiment ID:15 solution ID:4 conditons ID:1
    Type 3D CBCA(CO)NH
    IDs experiment ID:16 solution ID:4 conditons ID:1
    Type 3D HNCACB
    IDs experiment ID:2 solution ID:2 conditons ID:1
    Type 2D 1H-13C HSQC
    IDs experiment ID:3 solution ID:2 conditons ID:1
    Type 3D CBCA(CO)NH
    IDs experiment ID:4 solution ID:2 conditons ID:1
    Type 3D HNCACB
    IDs experiment ID:5 solution ID:2 conditons ID:1
    Type 3D HBHA(CO)NH
    IDs experiment ID:6 solution ID:2 conditons ID:1
    Type 3D HBHANH
    IDs experiment ID:7 solution ID:2 conditons ID:1
    Type 3D HNCO
    IDs experiment ID:8 solution ID:2 conditons ID:1
    Type 3D C(CO)NH
    IDs experiment ID:9 solution ID:2 conditons ID:1
    Type 3D HCCH-TOCSY
     
  •   Software and Computing Hide
    NMR Software
    Authors Laskowski and MacArthur
    Classification validation
    Software Name ProcheckNMR
    Authors Laskowski and MacArthur
    Classification data analysis
    Software Name ProcheckNMR
    Authors Cornilescu, Delaglio and Bax
    Classification refinement
    Software Name TALOS
    Authors Cornilescu, Delaglio and Bax
    Classification geometry optimization
    Software Name TALOS
    Authors Brunger, Adams, Clore, Gros, Nilges and Read
    Classification structure solution
    Software Name CNS
    Authors CCPN
    Classification peak picking
    Software Name CCPN_Analysis
    Authors CCPN
    Classification chemical shift assignment
    Software Name CCPN_Analysis
    Authors CCPN
    Classification data analysis
    Software Name CCPN_Analysis
    Authors Johnson, One Moon Scientific
    Classification chemical shift assignment
    Software Name NMRView
    Authors Johnson, One Moon Scientific
    Classification peak picking
    Software Name NMRView
    Authors Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
    Classification processing
    Software Name NMRPipe