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An Information Portal to 105025 Biological Macromolecular Structures

SOLUTION NMR
Materials and Methods page
2JMU
  •   NMR Eperiment Details Hide
    Representative Model Choice Rationale
    lowest energy  
     
    Spectrometer Info
    Field Strength 900.0
    Manufacturer Varian
    Model INOVA
    Field Strength 750.0
    Manufacturer Bruker
    Model DMX
    Field Strength 600.0
    Manufacturer Varian
    Model INOVA
     
    Sample Conditions
    IDs solution ID:1 condition ID:1
    Sample Contents 1.0 mM [U-100% 13C, U-100% 15N] ThTPase_MOUSE, 10 mM MOPS, 100 mM NaCl, 90% H2O, 10% D2O
    Solvent System 90% H2O, 10% D2O
    Ionic Strength 100
    pH 7.0
    Pressure 1
    Pressure Units atm
    Temperature 298
     
     
  •   NMR Refinement Information Hide
    Refinement
    Method torsion angle dynamics,simulated annealing,distance geometry
    Details STRUCTURES ARE BASED ON A TOTAL OF 4699 NOE RESTRAINTS (1639 INTRA, 921 SEQUENTIAL, 757 MEDIUM AND 1382 LONG RANGE), 176 HBOND RESTRAINTS, AND 289 PHI AND PSI DIHEDRAL ANGLE CONSTRAINTS
     
  •   NMR Ensemble Information Hide
    Ensemble
    Conformer Selection Criteria structures with the lowest energy
    Conformers Calculated Total Number 100
    Conformers Submitted Total Number 20
     
  •   NMR Experimental Information Hide
    Experiment
    IDs experiment ID:1 solution ID:1 conditons ID:1
    Type 1H,15N-HSQC
    IDs experiment ID:10 solution ID:1 conditons ID:1
    Type 15N-EDITED 1H,1H-NOESY
    IDs experiment ID:11 solution ID:1 conditons ID:1
    Type 13C-EDITED AROMATIC 1H,1H-NOESY
    IDs experiment ID:2 solution ID:1 conditons ID:1
    Type 1H,13C-HSQC
    IDs experiment ID:3 solution ID:1 conditons ID:1
    Type HNCACB
    IDs experiment ID:4 solution ID:1 conditons ID:1
    Type 1H,13C-HSQC
    IDs experiment ID:5 solution ID:1 conditons ID:1
    Type CBCACONH
    IDs experiment ID:6 solution ID:1 conditons ID:1
    Type CCONH
    IDs experiment ID:7 solution ID:1 conditons ID:1
    Type HCCHTOCSY
    IDs experiment ID:8 solution ID:1 conditons ID:1
    Type HBACONH
    IDs experiment ID:9 solution ID:1 conditons ID:1
    Type 13C-EDITED 1H,1H-NOESY
     
  •   Software and Computing Hide
    NMR Software
    Authors Guntert, Mumenthaler and Wuthrich
    Classification structural calculation
    Software Name Cyana 2.1
    Authors Bartels, Guntert, Billeter and Wuthrich
    Classification data analysis
    Software Name GARANT 2.1
    Authors Goddard and Kneller
    Classification data analysis
    Software Name SPARKY 3.113
    Authors Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
    Classification processing
    Software Name nmrPipe 97.027.12.56
    Authors Bruker
    Classification collection
    Software Name XWINNMR 3.5
    Authors Schwieters, Kuszewski, Tjandra and Clore
    Classification refinement
    Software Name Xplor-NIH 2.9.3