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X-RAY DIFFRACTION
Materials and Methods page
2HR0
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION
    pH 7.5
    Details 200 mM TRIS, 100 mM NaCl, 20 mM LiCl, 15% PEG6000, pH 7.5, VAPOR DIFFUSION
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 151.2 α = 90
    b = 142.7 β = 98.9
    c = 203.7 γ = 90
     
    Space Group
    Space Group Name:    C 1 2 1
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type MAR CCD 165 mm
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type APS BEAMLINE 22-ID
    Wavelength List 0.9791
    Site APS
    Beamline 22-ID
     
     
  •   Refinement Data Hide
    Reflection Details
    Resolution(High) 2.26
    Resolution(Low) 45.3
    Number Reflections(All) 194135
    Number Reflections(Observed) 188893
    Percent Possible(Observed) 97.3
    R Merge I(Observed) 0.038
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 2.26
    Resolution(Low) 45.23
    Cut-off Sigma(F) 0.0
    Number of Reflections(Observed) 188893
    Number of Reflections(R-Free) 9694
    Percent Reflections(Observed) 97.43
    R-Factor(All) 0.18
    R-Work 0.18
    R-Free 0.194
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 28.571
    Anisotropic B[1][1] -0.06
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] -0.02
    Anisotropic B[2][2] 0.01
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] 0.04
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 2.26
    Shell Resolution(Low) 2.319
    Number of Reflections(Observed) 11809
    Number of Reflections(R-Free) 599
    Number of Reflections(R-Work) 11210
    R-Factor(R-Work) 0.214
    R-Factor(R-Free) 0.259
    Percent Reflections(Observed) 80.55
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_scangle_it 3.09
    r_scbond_it 2.047
    r_mcangle_it 1.175
    r_mcbond_it 0.693
    r_bond_refined_d 0.011
    r_angle_refined_deg 1.392
    r_dihedral_angle_1_deg 6.384
    r_dihedral_angle_2_deg 39.946
    r_dihedral_angle_3_deg 20.047
    r_dihedral_angle_4_deg 17.618
    r_chiral_restr 0.102
    r_gen_planes_refined 0.005
    r_nbd_refined 0.3
    r_nbtor_refined 0.312
    r_xyhbond_nbd_refined 0.233
    r_symmetry_vdw_refined 0.426
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 12240
    Nucleic Acid Atoms 0
    Heterogen Atoms 10
    Solvent Atoms 708
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) HKL-2000
    Data Reduction (data scaling) HKL-2000
    Structure Solution PHASER
    Structure Refinement REFMAC 5.2.0019
     
    Software
    data extraction pdb_extract version: 2.000
    refinement REFMAC5 version: 5.2.0019