ELECTRON MICROSCOPY Experimental Data



Virus Particulars
Virus Host Category Virus Host Species Virus Host Growth Cell Virus Type Virus Isolate ICTVDB ID
BACTERIA Escherichia coli -- VIRION STRAIN --
EM Sample
Sample Vitrification Details --
Sample Aggregation State PARTICLE
Sample Reconstruction Method SINGLE PARTICLE
Name of Sample bacteriophage T4 baseplate
EM Data Acquisition
Date of Experiment 2002-01-06
Temperature (Kelvin) --
Microscope Model FEI/PHILIPS CM300FEG/T
Detector Type KODAK SO-163 FILM
Minimum Defocus (nm) 500.0
Maximum Defocus (nm) 3400.0
Minimum Tilt Angle (degrees) --
Maximum Tilt Angle (degrees) --
Nominal CS --
Imaging Mode BRIGHT FIELD
Electron Dose (electrons per Å**-2) 20.0
Illumination Mode SPOT SCAN
Nominal Magnification 45000
Calibrated Magnification --
Source FIELD EMISSION GUN
Acceleration Voltage (kV) 300
Imaging Details --
3D Reconstruction
Software Package(s) SPIDER
Reconstruction Method(s) --
EM Image Reconstruction Statistics
Number of Particles 1965
Other Details THE COORDINATES CONTAIN CA ONLY. RESIDUES 161-405 ARE MISSING. PLEASE SEE THE RELATED EMDB ENTRY FOR DETAILS OF THE EM RECONSTRUCTION
Effective Resolution 17.0
EM Map-Model Fitting and Refinement
Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Fitting Software
REAL RIGID BODY FIT correlation coefficient as defined by the program COLORES/SITUS -- -- --