POP-OUT | CLOSE
 
X-RAY DIFFRACTION
Materials and Methods page
2F7I
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 7
    Temperature 293.0
    Details AMMONIUM SULFATE, 100 MM KCL, 1 MM EDTA, 10 MM SODIUM PHOSPHATE, SOAKED WITH THE INHIBITOR, pH 7.00, VAPOR DIFFUSION, HANGING DROP, temperature 293K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 43.24 α = 90
    b = 85.14 β = 90
    c = 64.77 γ = 90
     
    Space Group
    Space Group Name:    P 21 21 2
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 120
     
    Diffraction Detector
    Detector CCD
    Type CCD-PXL-L600
    Collection Date 2003-01-05
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source ROTATING ANODE
    Type RIGAKU RU200
    Wavelength 1.541
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma (F) 0.0
    Observed Criterion Sigma(I) 0.0
    Resolution(High) 1.6
    Resolution(Low) 64.9
    Number Reflections(All) 30717
    Number Reflections(Observed) 30717
    Percent Possible(Observed) 99.7
     
    High Resolution Shell Details
    Resolution(High) 1.6
    Resolution(Low) 1.67
    Percent Possible(All) 99.87
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 1.6
    Resolution(Low) 64.5
    Cut-off Sigma(F) 0.0
    Number of Reflections(all) 30717
    Number of Reflections(Observed) 30717
    Number of Reflections(R-Free) 1624
    Percent Reflections(Observed) 99.68
    R-Factor(All) 0.23415
    R-Factor(Observed) 0.23415
    R-Work 0.23319
    R-Free 0.25191
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 21.587
    Anisotropic B[1][1] -0.1
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] -0.05
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] 0.15
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 1.597
    Shell Resolution(Low) 1.639
    Number of Reflections(R-Free) 111
    Number of Reflections(R-Work) 2136
    R-Factor(R-Work) 0.27
    R-Factor(R-Free) 0.335
    Percent Reflections(Observed) 96.6
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_scangle_it 2.785
    r_scbond_it 1.968
    r_mcangle_it 1.352
    r_mcbond_other 0.155
    r_mcbond_it 1.198
    r_nbd_refined 0.185
    r_gen_planes_other 0.001
    r_gen_planes_refined 0.004
    r_chiral_restr 0.071
    r_dihedral_angle_4_deg 13.336
    r_dihedral_angle_3_deg 15.227
    r_dihedral_angle_2_deg 33.421
    r_dihedral_angle_1_deg 5.556
    r_angle_other_deg 0.689
    r_angle_refined_deg 1.241
    r_bond_other_d 0.001
    r_bond_refined_d 0.008
    r_nbd_other 0.184
    r_nbtor_refined 0.178
    r_nbtor_other 0.081
    r_xyhbond_nbd_refined 0.121
    r_symmetry_vdw_refined 0.252
    r_symmetry_vdw_other 0.195
    r_symmetry_hbond_refined 0.124
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 1753
    Nucleic Acid Atoms 0
    Heterogen Atoms 34
    Solvent Atoms 192
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) SAINT
    Data Reduction (data scaling) PROSCALE
    Structure Solution AMORE
    Structure Refinement REFMAC 5.2.0005
     
    Software
    refinement REFMAC version: 5.2.0005
    model building AMORE
    data reduction PROSCALE
    data collection SAINT