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X-RAY DIFFRACTION
Materials and Methods page
2F4V
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 403.32 α = 90
    b = 403.32 β = 90
    c = 176.68 γ = 90
     
    Space Group
    Space Group Name:    P 41 21 2
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Collection Date 2002-06-01
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type ESRF BEAMLINE ID29
    Wavelength List 0.991
    Site ESRF
    Beamline ID29
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma (F) 0.0
    Observed Criterion Sigma(I) 0.0
    Resolution(High) 3.8
    Resolution(Low) 30
    Number Reflections(All) 140000
    Number Reflections(Observed) 138452
    Percent Possible(Observed) 97.4
    R Merge I(Observed) 0.161
     
    High Resolution Shell Details
    Resolution(High) 3.8
    Resolution(Low) 3.93
    Percent Possible(All) 96.2
    R Merge I(Observed) 0.68
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 3.8
    Resolution(Low) 30.0
    Cut-off Sigma(F) 0.0
    Number of Reflections(all) 138452
    Number of Reflections(Observed) 131434
    Number of Reflections(R-Free) 6940
    Percent Reflections(Observed) 97.25
    R-Factor(All) 0.26179
    R-Factor(Observed) 0.26179
    R-Work 0.25902
    R-Free 0.31456
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 84.895
    Anisotropic B[1][1] 0.03
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] 0.03
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] -0.05
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 3.8
    Shell Resolution(Low) 3.901
    Number of Reflections(R-Free) 505
    Number of Reflections(R-Work) 9234
    R-Factor(R-Work) 0.298
    R-Factor(R-Free) 0.346
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_scangle_it 1.905
    r_scbond_it 1.109
    r_mcangle_it 2.944
    r_mcbond_it 1.618
    r_nbd_refined 0.292
    r_gen_planes_refined 0.008
    r_chiral_restr 0.101
    r_dihedral_angle_1_deg 12.841
    r_angle_refined_deg 1.635
    r_bond_refined_d 0.019
    r_xyhbond_nbd_refined 0.243
    r_metal_ion_refined 0.313
    r_symmetry_vdw_refined 0.215
    r_symmetry_hbond_refined 0.243
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 19076
    Nucleic Acid Atoms 32471
    Heterogen Atoms 181
    Solvent Atoms 0
     
     
  •   Software and Computing Hide
    Computing
    Structure Refinement REFMAC 5.1.24
     
    Software
    refinement REFMAC version: 5.1.24