X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 53.27 α = 90
b = 71.71 β = 90
c = 72.21 γ = 90
Symmetry
Space Group P 21 21 21

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 100
Diffraction Detector
Detector Diffraction Type Details Collection Date
CCD MSC MIRRORS --
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
ROTATING ANODE RIGAKU ROTATING ANODE -- -- --

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
2.2 30 93.5 0.04 -- -- 1.55 -- 25370 -- 2.0 --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
OTHER 2.2 29.89 -- -- -- 13575 716 98.0 -- 0.181 0.177 0.252 RANDOM
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 2.2 2.26 -- 60 906 0.183 0.274 -- --
Temperature Factor Modeling
Temperature Factor Value
Mean Isotropic B 32.57
Anisotropic B[1][1] -0.14
Anisotropic B[1][2] 0.0
Anisotropic B[1][3] 0.0
Anisotropic B[2][2] 0.08
Anisotropic B[2][3] 0.0
Anisotropic B[3][3] 0.06
RMS Deviations
Key Refinement Restraint Deviation
r_nbd_other 0.181
r_symmetry_vdw_other 0.222
r_angle_refined_deg 1.342
r_xyhbond_nbd_refined 0.167
r_symmetry_hbond_refined 0.144
r_dihedral_angle_2_deg 44.004
r_scangle_it 4.573
r_mcangle_it 3.717
r_gen_planes_other 0.001
r_nbd_refined 0.21
r_dihedral_angle_4_deg 19.794
r_scbond_it 3.522
r_dihedral_angle_1_deg 5.955
r_dihedral_angle_3_deg 16.984
r_symmetry_vdw_refined 0.148
r_nbtor_refined 0.178
r_bond_other_d 0.001
r_nbtor_other 0.087
r_angle_other_deg 0.838
r_chiral_restr 0.084
r_bond_refined_d 0.012
r_gen_planes_refined 0.004
r_mcbond_it 3.203
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 2278
Nucleic Acid Atoms 0
Heterogen Atoms 8
Solvent Atoms 282

Software

Software
Software Name Purpose
REFMAC refinement version: 5.2.0005
d*TREK data reduction
d*TREK data scaling