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X-RAY DIFFRACTION
Materials and Methods page
1W50
  •   Crystallization Hide
    Crystallization Experiments
    pH 6.6
    Details pH 6.60
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 103.24 α = 90
    b = 103.24 β = 90
    c = 169.11 γ = 120
     
    Space Group
    Space Group Name:    P 61 2 2
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type ADSC
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type ESRF BEAMLINE ID14-1
    Wavelength 0.933
    Site ESRF
    Beamline ID14-1
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma(I) 0.0
    Resolution(High) 1.75
    Resolution(Low) 39.5
    Number Reflections(Observed) 51594
    Percent Possible(Observed) 95.9
    R Merge I(Observed) 0.1
    Redundancy 6.3
     
    High Resolution Shell Details
    Resolution(High) 1.75
    Resolution(Low) 1.84
    Percent Possible(All) 97.2
    R Merge I(Observed) 0.45
    Mean I Over Sigma(Observed) 1.7
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 1.75
    Resolution(Low) 39.52
    Number of Reflections(Observed) 48964
    Number of Reflections(R-Free) 2624
    Percent Reflections(Observed) 95.1
    R-Factor(Observed) 0.245
    R-Work 0.244
    R-Free 0.283
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 30.01
    Anisotropic B[1][1] -0.53
    Anisotropic B[1][2] -0.26
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] -0.53
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] 0.79
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 1.75
    Shell Resolution(Low) 1.79
    Number of Reflections(R-Free) 201
    Number of Reflections(R-Work) 3586
    R-Factor(R-Work) 0.31
    R-Factor(R-Free) 0.354
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_scangle_it 5.221
    r_scbond_it 3.752
    r_mcangle_it 4.075
    r_mcbond_it 2.943
    r_nbd_refined 0.219
    r_gen_planes_other 0.003
    r_gen_planes_refined 0.006
    r_chiral_restr 0.084
    r_dihedral_angle_1_deg 7.215
    r_angle_other_deg 0.84
    r_angle_refined_deg 1.427
    r_bond_other_d 0.002
    r_bond_refined_d 0.014
    r_nbd_other 0.24
    r_nbtor_other 0.086
    r_xyhbond_nbd_refined 0.218
    r_symmetry_vdw_refined 0.221
    r_symmetry_vdw_other 0.29
    r_symmetry_hbond_refined 0.181
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 2966
    Nucleic Acid Atoms 0
    Heterogen Atoms 4
    Solvent Atoms 279
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) MOSFLM
    Data Reduction (data scaling) CCP4 (SCALA)
    Structure Solution EPMR
    Structure Refinement REFMAC 5.1.29
     
    Software
    refinement REFMAC version: 5.1.29
    model building EPMR