POP-OUT | CLOSE

An Information Portal to 109093 Biological Macromolecular Structures

X-RAY DIFFRACTION
Materials and Methods page
1VRT
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 141.8 α = 90
    b = 116.7 β = 90
    c = 66.4 γ = 90
     
    Space Group
    Space Group Name:    P 21 21 21
     
     
  •   Diffraction Hide
    Diffraction Detector
    Detector IMAGE PLATE
    Type FUJI
    Collection Date 1994-03-03
     
    Diffraction Radiation
     
    Diffraction Source
    Source SYNCHROTRON
    Type PHOTON FACTORY BEAMLINE BL-6A
    Wavelength 0.980
    Site PHOTON FACTORY
    Beamline BL-6A
     
     
  •   Refinement Data Hide
    Reflection Details
    Resolution(High) 2.2
    Resolution(Low) 30
    Number Reflections(Observed) 49373
    Percent Possible(Observed) 86.8
    R Merge I(Observed) 0.129
    Redundancy 4.97
     
     
  •   Refinement Hide
    Refinement Statistics
    reflnsShellList 2.2
    Resolution(Low) 25.0
    Cut-off Sigma(F) 0.0
    Number of Reflections(Observed) 49347
    Percent Reflections(Observed) 87.1
    R-Factor(Observed) 0.186
    R-Work 0.186
     
    Temperature Factor Modeling
    Mean Isotropic B Value 52.0
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    x_improper_angle_d 1.6
    x_bond_d 0.015
    x_angle_deg 1.9
    x_dihedral_angle_d 25.0
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 7627
    Nucleic Acid Atoms 0
    Heterogen Atoms 21
    Solvent Atoms 305
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) DENZO
    Structure Solution X-PLOR 3.1
    Structure Refinement X-PLOR 3.1
     
    Software
    refinement X-PLOR version: 3.1
    model building X-PLOR version: 3.1