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X-RAY DIFFRACTION
Materials and Methods page
1SHY
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 8
    Temperature 292.0
    Details PEG, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 292K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 137.05 α = 90
    b = 186.35 β = 90
    c = 66.66 γ = 90
     
    Space Group
    Space Group Name:    P 21 21 2
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector CCD
    Type ADSC QUANTUM 4
    Collection Date 2003-09-07
     
    Diffraction Radiation
    Monochromator monochromator crystal
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type CHESS BEAMLINE A1
    Wavelength List 0.928
    Site CHESS
    Beamline A1
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma (F) 0.0
    Observed Criterion Sigma(I) -3.0
    Resolution(High) 3.2
    Resolution(Low) 50
    Number Reflections(Observed) 28312
    Percent Possible(Observed) 99.4
     
    High Resolution Shell Details
    Resolution(High) 3.2
    Resolution(Low) 3.31
    Percent Possible(All) 100.0
    R-Sym I(Observed) 0.586
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 3.22
    Resolution(Low) 30.0
    Cut-off Sigma(F) 0.0
    Number of Reflections(Observed) 26830
    Number of Reflections(R-Free) 1417
    Percent Reflections(Observed) 99.12
    R-Factor(Observed) 0.21206
    R-Work 0.20904
    R-Free 0.26978
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Mean Isotropic B Value 56.027
    Anisotropic B[1][1] 2.22
    Anisotropic B[1][2] 0.0
    Anisotropic B[1][3] 0.0
    Anisotropic B[2][2] -2.24
    Anisotropic B[2][3] 0.0
    Anisotropic B[3][3] 0.02
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 3.217
    Shell Resolution(Low) 3.282
    Number of Reflections(R-Free) 69
    Number of Reflections(R-Work) 1448
    R-Factor(R-Work) 0.327
    R-Factor(R-Free) 0.35
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    r_scangle_it 6.016
    r_scbond_it 3.68
    r_mcangle_it 6.377
    r_nbd_refined 0.246
    r_gen_planes_refined 0.004
    r_chiral_restr 0.12
    r_dihedral_angle_1_deg 8.567
    r_angle_refined_deg 1.537
    r_bond_refined_d 0.012
    r_xyhbond_nbd_refined 0.15
    r_symmetry_vdw_refined 0.186
    r_symmetry_hbond_refined 0.325
    r_mcbond_it 3.731
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 5735
    Nucleic Acid Atoms 0
    Heterogen Atoms 0
    Solvent Atoms 0
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) HKL-2000
    Data Reduction (data scaling) SCALEPACK
    Structure Solution AMORE
    Structure Refinement REFMAC 5.1.24
     
    Software
    refinement REFMAC version: 5.1.24