X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystallization

Crystalization Experiments
Method Vapor Diffusion Hanging Drop
pH 7.5
Temperature 298.0
Details PEG-3400, MOPS, LiCl, KCl, 4-hydroxybenzoyl CoA, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 113.1 α = 90
b = 113.1 β = 90
c = 60.1 γ = 120
Symmetry
Space Group P 32 2 1

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 110
Diffraction Detector
Detector Diffraction Type Details Collection Date
AREA DETECTOR SIEMENS HI-STAR goebel mirrors 2002-05-20
Diffraction Radiation
Monochromator Protocol
goebel optics SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
ROTATING ANODE RIGAKU RU200 1.5418 -- --

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
1.95 30 94.1 -- 0.051 -- 3.6 30625 30625 0.0 0.0 --
High Resolution Shell
Resolution (High) Resolution (Low) Percent Possible (All) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All)
1.95 2.04 83.4 -- 0.22 4.1 1.9 3403

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
MOLECULAR REPLACEMENT 1.95 30.0 0.0 0.0 30567 30567 3303 94.1 -- 0.183 0.182 0.237 RANDOM
RMS Deviations
Key Refinement Restraint Deviation
t_bond_d 0.013
t_angle_deg 2.24
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 2148
Nucleic Acid Atoms 0
Heterogen Atoms 116
Solvent Atoms 241

Software

Computing
Computing Package Purpose
FRAMBO Data Reduction (intensity integration)
SAINT Data Reduction (data scaling)
TNT Structure Solution
TNT Structure Refinement
Software
Software Name Purpose
TNT refinement
TNT model building
SAINT data reduction
FRAMBO data collection