X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 61.17 α = 90
b = 86.92 β = 90
c = 74.82 γ = 90
Symmetry
Space Group P 21 21 2

Diffraction

Diffraction Detector
Detector Diffraction Type Details Collection Date
-- -- -- --
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
-- -- -- -- --

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
2.15 19.75 -- -- -- -- -- -- 21068 -- 0.0 --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
MOLECULAR REPLACEMENT 2.2 15.0 -- 0.0 -- 19621 1044 99.4 -- 0.213 0.21 0.258 RANDOM
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 2.2 2.26 -- 79 1403 0.26 0.298 -- --
Temperature Factor Modeling
Temperature Factor Value
Mean Isotropic B 39.02
Anisotropic B[1][1] -0.02
Anisotropic B[1][2] 0.0
Anisotropic B[1][3] 0.0
Anisotropic B[2][2] 1.92
Anisotropic B[2][3] 0.0
Anisotropic B[3][3] -1.9
RMS Deviations
Key Refinement Restraint Deviation
r_scangle_it 3.864
r_scbond_it 2.341
r_mcangle_it 1.921
r_nbd_refined 0.212
r_gen_planes_other 0.002
r_gen_planes_refined 0.005
r_chiral_restr 0.095
r_dihedral_angle_1_deg 5.09
r_angle_other_deg 0.852
r_angle_refined_deg 1.419
r_bond_other_d 0.002
r_bond_refined_d 0.014
r_nbd_other 0.24
r_nbtor_other 0.09
r_xyhbond_nbd_refined 0.161
r_symmetry_vdw_refined 0.267
r_symmetry_vdw_other 0.274
r_symmetry_hbond_refined 0.196
r_mcbond_it 1.021
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 3490
Nucleic Acid Atoms 0
Heterogen Atoms 52
Solvent Atoms 139

Software

Computing
Computing Package Purpose
REFMAC 5.1.24 Structure Refinement
Software
Software Name Purpose
REFMAC version: 5.1.24 refinement