X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 71.03 α = 90
b = 118.14 β = 90
c = 184.58 γ = 90
Symmetry
Space Group P 21 21 21

Diffraction

Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
1.9 20 99.7 -- 0.126 -- -- -- 122631 -- -- --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
MIR 1.9 20.0 -- 0.0 -- 115106 6101 98.71 0.25614 0.25614 0.25396 0.29807 RANDOM
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 1.9 2.002 -- 829 15551 0.311 0.338 -- --
Temperature Factor Modeling
Temperature Factor Value
Mean Isotropic B 39.52
Anisotropic B[1][1] -0.4
Anisotropic B[1][2] 0.0
Anisotropic B[1][3] 0.0
Anisotropic B[2][2] -1.04
Anisotropic B[2][3] 0.0
Anisotropic B[3][3] 1.43
RMS Deviations
Key Refinement Restraint Deviation
r_nbd_other 0.255
r_xyhbond_nbd_refined 0.214
r_xyhbond_nbd_other 0.184
r_nbtor_other 0.747
r_angle_refined_deg 0.649
r_gen_planes_refined 0.002
r_scbond_it 0.621
r_dihedral_angle_1_deg 8.085
r_bond_other_d 0.0
r_bond_refined_d 0.004
r_symmetry_vdw_refined 0.501
r_angle_other_deg 0.527
r_mcbond_it 0.616
r_gen_planes_other 0.001
r_nbd_refined 0.256
r_symmetry_vdw_other 0.489
r_scangle_it 0.889
r_dihedral_angle_2_deg 21.363
r_chiral_restr 0.043
r_symmetry_hbond_refined 0.483
r_mcangle_it 1.141
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 11890
Nucleic Acid Atoms 0
Heterogen Atoms 56
Solvent Atoms 472

Software

Software
Software Name Purpose
REFMAC refinement version: 5.0