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X-RAY DIFFRACTION
Materials and Methods page
1ODV
  •   Crystallization Hide
    Crystallization Experiments
    pH 7.5
    Details CRYSTALS WERE GROWN BY EQUILIBRATION OF 1 ML OF 30 MG/ML PROTEIN WITH 1 ML OF MOTHER LIQUOR (1.8 M AMMONIUM SULPHATE, 10 MM COCL[2], 100 MM MES PH 6.5) AGAINST A 1 ML RESERVOIR OF MOTHER LIQUOR. CRYSTALS APPEARED AFTER 2-3 DAYS A LARGEST DIMENSION OF 0.4 MM.
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 82.57 α = 90
    b = 82.57 β = 90
    c = 63.45 γ = 90
     
    Space Group
    Space Group Name:    P 43 21 2
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Collection Date 2000-11-15
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type ESRF BEAMLINE ID14-1
    Wavelength 0.934
    Site ESRF
    Beamline ID14-1
     
     
  •   Refinement Data Hide
    Reflection Details
    Resolution(High) 1.14
    Resolution(Low) 17
    Number Reflections(Observed) 299780
    Percent Possible(Observed) 94.4
    R Merge I(Observed) 0.06
    Redundancy 4.0
     
    High Resolution Shell Details
    Resolution(High) 1.14
    Resolution(Low) 1.18
    Percent Possible(All) 89.2
    R Merge I(Observed) 0.217
    Mean I Over Sigma(Observed) 4.3
    Redundancy 3.3
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 1.14
    Resolution(Low) 17.0
    Cut-off Sigma(F) 0.0
    Number of Reflections(all) 74065
    Number of Reflections(R-Free) 1096
    Percent Reflections(Observed) 93.0
    R-Factor(All) 0.1473
    R-Factor(Observed) 0.1473
    R-Free 0.1774
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Data Not Available
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    s_approx_iso_adps 0.06
    s_similar_adp_cmpnt 0.032
    s_rigid_bond_adp_cmpnt 0.005
    s_anti_bump_dis_restr 0.052
    s_non_zero_chiral_vol 0.067
    s_zero_chiral_vol 0.063
    s_from_restr_planes 0.0304
    s_similar_dist 0.0
    s_angle_d 0.027
    s_bond_d 0.01
     
    Coordinate Error
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 1576
    Nucleic Acid Atoms 0
    Heterogen Atoms 22
    Solvent Atoms 364
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) DENZO
    Data Reduction (data scaling) SCALEPACK
    Structure Solution SHELX
    Structure Refinement SHELXL-97
     
    Software
    refinement SHELXL-97
    model building SHELX