X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 115.42 α = 90
b = 115.42 β = 90
c = 115.42 γ = 90
Symmetry
Space Group P 41 3 2

Diffraction

Diffraction Detector
Detector Diffraction Type Details Collection Date
CCD MARRESEARCH -- --
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON APS BEAMLINE 32-ID 0.9798 APS 32-ID

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
2.2 31.94 100.0 0.096 -- -- 42.2 13895 13895 -- -- --
High Resolution Shell
Resolution (High) Resolution (Low) Percent Possible (All) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All)
2.2 2.26 100.0 0.077 -- 10.3 43.2 --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
Se-Met SAD phasing 2.2 32.01 -- 0.0 -- 13895 695 -- -- -- 0.229 0.275 --
Temperature Factor Modeling
Temperature Factor Value
Mean Isotropic B 33.373
Anisotropic B[1][1] 0.0
Anisotropic B[1][2] 0.0
Anisotropic B[1][3] 0.0
Anisotropic B[2][2] 0.0
Anisotropic B[2][3] 0.0
Anisotropic B[3][3] 0.0
RMS Deviations
Key Refinement Restraint Deviation
p_chiral_restr 0.18
p_bond_d 0.015
p_scbond_it 3.499
p_angle_d 2.26
p_mcbond_it 1.859
p_scangle_it 4.648
p_plane_restr 0.012
p_planar_tor 2.706
p_mcangle_it 3.284
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 1254
Nucleic Acid Atoms 0
Heterogen Atoms 34
Solvent Atoms 113

Software

Software
Software Name Purpose
MOSFLM data reduction
SCALA data scaling
TRUNCATE data reduction
REFMAC refinement version: 4.0
CCP4 data scaling version: (SCALA
TRUNCATE data scaling