X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystallization

Crystalization Experiments
Method Vapor Diffusion
pH 8.1
Temperature 298.0
Details sodium citrate soak at target pH (8.99). vapor diffusion at 298 K, pH 8.10

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 63.96 α = 90
b = 61.73 β = 90
c = 70.08 γ = 90
Symmetry
Space Group P 21 21 21

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 298
Diffraction Detector
Detector Diffraction Type Details Collection Date
IMAGE PLATE RIGAKU RAXIS IV -- 2001-10-04
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
ROTATING ANODE RIGAKU RU200 -- -- --

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
1.65 37.52 76.5 0.079 -- -- 2.1 34121 26088 -- 0.7 --
High Resolution Shell
Resolution (High) Resolution (Low) Percent Possible (All) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All)
1.65 1.72 -- 0.28 -- 1.3 -- 3941

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
FOURIER SYNTHESIS 1.65 7.0 -- 1.6 33550 24557 2491 73.19 -- 0.193 0.188 0.234 --
RMS Deviations
Key Refinement Restraint Deviation
x_angle_deg 3.8
x_bond_d 0.019
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 3340
Nucleic Acid Atoms 0
Heterogen Atoms 56
Solvent Atoms 411

Software

Software
Software Name Purpose
bioteX data collection version: 1.2
bioteX data reduction version: 1.2
X-PLOR refinement version: 3.851
bioteX data scaling
Quanta model building