X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystallization

Crystalization Experiments
pH 7.5
Details pH 7.5

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 128.9 α = 90
b = 128.9 β = 90
c = 139.8 γ = 120
Symmetry
Space Group P 62 2 2

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 298
Diffraction Detector
Detector Diffraction Type Details Collection Date
AREA DETECTOR XUONG-HAMLIN MULTIWIRE -- --
Diffraction Radiation
Monochromator Protocol
GRAPHITE(002) --
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
ROTATING ANODE RIGAKU RUH2R -- -- --

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
2.8 10 100.0 0.074 -- -- 7.0 -- 16991 -- 0.0 --
High Resolution Shell
Resolution (High) Resolution (Low) Percent Possible (All) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All)
2.8 3.0 100.0 0.23 -- 3.4 3.0 --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
MOLECULAR REPLACEMENT 2.8 10.0 -- 0.0 -- 16991 -- 100.0 -- 0.19 0.19 0.257 --
Temperature Factor Modeling
Temperature Factor Value
Mean Isotropic B 32.4
RMS Deviations
Key Refinement Restraint Deviation
x_angle_deg 3.06
x_bond_d 0.01
x_dihedral_angle_d 25.2
x_improper_angle_d 2.5
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 2913
Nucleic Acid Atoms 0
Heterogen Atoms 13
Solvent Atoms 0

Software

Software
Software Name Purpose
X-PLOR model building version: 3.1
X-PLOR refinement version: 3.1
KUAVST data scaling
KUMDS data scaling
X-PLOR phasing version: 3.1