X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystallization

Crystalization Experiments
pH 7.1
Details 0.1 PHOSPHATE BUFFER PH 7.1 10 MG/ML PROTEIN

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 122.18 α = 90
b = 42.17 β = 92.61
c = 91.67 γ = 90
Symmetry
Space Group I 1 21 1

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 150
Diffraction Detector
Detector Diffraction Type Details Collection Date
IMAGE PLATE RIGAKU RAXIS -- --
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
ROTATING ANODE RIGAKU RU200 -- -- --

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
1.7 24 99.0 0.038 0.038 -- 6.0 -- 48028 -- -- 26.0

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
OTHER 1.7 24.0 -- 0.0 -- 48082 2425 99.0 -- -- 0.1886 0.237 RANDOM
Temperature Factor Modeling
Temperature Factor Value
Mean Isotropic B 28.4
Anisotropic B[1][1] 1.69
Anisotropic B[1][2] 0.0
Anisotropic B[1][3] 1.08
Anisotropic B[2][2] 1.57
Anisotropic B[2][3] 0.0
Anisotropic B[3][3] -2.86
RMS Deviations
Key Refinement Restraint Deviation
p_planar_d 0.043
p_scangle_it 5.953
p_bond_d 0.02
p_staggered_tor 15.3
p_scbond_it 4.22
p_singtor_nbd 0.187
p_planar_tor 3.6
p_transverse_tor 39.8
p_mcangle_it 4.285
p_plane_restr 0.0157
p_multtor_nbd 0.28
p_chiral_restr 0.161
p_angle_d 0.035
p_mcbond_it 3.478
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 2484
Nucleic Acid Atoms 0
Heterogen Atoms 90
Solvent Atoms 523

Software

Software
Software Name Purpose
CCP4 model building
REFMAC refinement
DENZO data reduction
CCP4 data scaling
CCP4 phasing