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X-RAY DIFFRACTION
Materials and Methods page
1LY0
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, HANGING DROP
    pH 6.5
    Temperature 293.0
    Details tartrate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 57.87 α = 90
    b = 57.87 β = 90
    c = 149.96 γ = 90
     
    Space Group
    Space Group Name:    P 41 21 2
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector IMAGE PLATE
    Type MARRESEARCH
    Collection Date 2000-12-17
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type LURE BEAMLINE DW32
    Wavelength List 0.9474
    Site LURE
    Beamline DW32
     
     
  •   Refinement Data Hide
    Reflection Details
    Observed Criterion Sigma(I) -3.0
    Resolution(High) 1.36
    Resolution(Low) 30
    Number Reflections(All) 55721
    Number Reflections(Observed) 55482
    Percent Possible(Observed) 99.9
    Redundancy 7.3
     
    High Resolution Shell Details
    Resolution(High) 1.36
    Resolution(Low) 1.41
    Percent Possible(All) 99.9
    R-Sym I(Observed) 0.151
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MOLECULAR REPLACEMENT
    reflnsShellList 1.36
    Resolution(Low) 30.0
    Cut-off Sigma(F) 0.0
    Number of Reflections(all) 55482
    Number of Reflections(Observed) 55482
    Number of Reflections(R-Free) 5631
    R-Factor(All) 0.196
    R-Factor(Observed) 0.196
    R-Work 0.195
    R-Free 0.204
    R-Free Selection Details RANDOM
     
    Temperature Factor Modeling
    Data Not Available
     
    Resolution Shells
    Refinement method X-RAY DIFFRACTION
    Shell Resolution(High) 1.36
    Shell Resolution(Low) 1.41
    Number of Reflections(Observed) 5268
    Number of Reflections(R-Free) 530
    R-Factor(R-Work) 0.219
    R-Factor(R-Free) 0.24
    Percent Reflections(Observed) 99.9
     
    RMS Deviations
    Parameter Type Deviation from Ideal
    c_bond_d 0.005
    c_angle_deg 1.308
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 1550
    Nucleic Acid Atoms 0
    Heterogen Atoms 10
    Solvent Atoms 325
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) DENZO
    Data Reduction (data scaling) SCALEPACK
    Structure Solution AMORE
    Structure Refinement CNS
     
    Software
    refinement CNS
    model building AMoRE
    data reduction SCALEPACK
    data collection DENZO