X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystallization

Crystalization Experiments
pH 7
Details pH 7.0

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 24.61 α = 90
b = 45.68 β = 90
c = 63.7 γ = 90
Symmetry
Space Group P 21 21 21

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 130
Diffraction Detector
Detector Diffraction Type Details Collection Date
IMAGE PLATE RIGAKU RAXIS II MSC-YALE MIRRORS 1997-10
Diffraction Radiation
Monochromator Protocol
NI FILTER --
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
ROTATING ANODE RIGAKU RUH2R -- -- --

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
2.1 23 81.0 0.062 -- -- 2.5 -- 3822 -- -- --
High Resolution Shell
Resolution (High) Resolution (Low) Percent Possible (All) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All)
2.1 2.25 64.0 0.15 -- 3.0 -- --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
MOLECULAR REPLACEMENT 2.1 9.0 -- 1.0 -- 3144 -- 67.0 -- -- 0.178 -- --
Temperature Factor Modeling
Temperature Factor Value
Mean Isotropic B 21.8
RMS Deviations
Key Refinement Restraint Deviation
p_plane_restr 0.024
p_chiral_restr 0.125
p_mcangle_it 1.814
p_singtor_nbd 0.18
p_staggered_tor 20.6
p_multtor_nbd 0.26
p_xyhbond_nbd 0.32
p_planar_tor 3.7
p_scbond_it 2.103
p_angle_d 0.032
p_bond_d 0.012
p_mcbond_it 1.151
p_scangle_it 2.954
p_planar_d 0.043
p_transverse_tor 25.2
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 634
Nucleic Acid Atoms 0
Heterogen Atoms 0
Solvent Atoms 67

Software

Software
Software Name Purpose
RIGAKU data collection version: R-AXIS
RIGAKU data reduction version: R-AXIS
PROFFT refinement
R-AXIS data reduction version: (RIGAKU)
R-AXIS data scaling version: (RIGAKU)