X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystallization

Crystalization Experiments
Method Vapor Diffusion Hanging Drop
pH 8
Temperature 293.0
Details VAPOR DIFFUSION, HANGING DROP at pH 8.0, 293K

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 67.06 α = 90
b = 30.18 β = 111.27
c = 68.74 γ = 90
Symmetry
Space Group P 1 21 1

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 100
Diffraction Detector
Detector Diffraction Type Details Collection Date
CCD ADSC QUANTUM 4 -- --
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON APS BEAMLINE 14-BM-D 1.653 APS 14-BM-D

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
1.9 27.3 90.4 0.094 -- -- -- -- 35617 -- 1.0 --
High Resolution Shell
Resolution (High) Resolution (Low) Percent Possible (All) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All)
1.9 1.94 78.6 0.307 -- 2.0 -- --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
MOLECULAR REPLACEMENT 1.9 15.0 -- 2.0 -- 35613 1795 -- -- -- 0.193 0.234 Random
Temperature Factor Modeling
Temperature Factor Value
Anisotropic B[1][1] -4.527
Anisotropic B[1][2] 0.0
Anisotropic B[1][3] -4.086
Anisotropic B[2][2] 3.152
Anisotropic B[2][3] 0.0
Anisotropic B[3][3] 1.375
RMS Deviations
Key Refinement Restraint Deviation
c_bond_d 0.096
c_angle_deg 1.328
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 2640
Nucleic Acid Atoms 0
Heterogen Atoms 32
Solvent Atoms 188

Software

Software
Software Name Purpose
AMoRE phasing
CNS refinement version: 1.0
DENZO data reduction
SCALEPACK data scaling