X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystallization

Crystalization Experiments

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 61.13 α = 90
b = 61.13 β = 90
c = 96.17 γ = 120
Symmetry
Space Group P 32 2 1

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 298
Diffraction Detector
Detector Diffraction Type Details Collection Date
AREA DETECTOR UCSD MARK III -- --
Diffraction Radiation
Monochromator Protocol
GRAPHITE SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
ROTATING ANODE RIGAKU RU200 -- -- --

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
1.9 30 93.0 0.04 -- -- -- -- 19140 -- -- 20.8

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
FOURIER SYNTHESIS 1.9 30.0 -- 0.0 -- 19140 -- 93.0 -- -- 0.174 -- --
Temperature Factor Modeling
Temperature Factor Value
Isotropic Thermal Model TNT BCORREL
RMS Deviations
Key Refinement Restraint Deviation
t_nbd 0.695
t_it 5.333
t_gen_planes 0.013
t_trig_c_planes 0.01
t_incorr_chiral_ct 0.0
t_dihedral_angle_d 15.296
t_angle_deg 2.051
t_bond_d 0.014
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 1289
Nucleic Acid Atoms 0
Heterogen Atoms 10
Solvent Atoms 114

Software

Computing
Computing Package Purpose
SDMS Data Reduction (intensity integration)
SDMS Data Reduction (data scaling)
TNT Structure Solution
TNT V. 5-E Structure Refinement
Software
Software Name Purpose
TNT version: 5E refinement
TNT model building