X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystallization

Crystalization Experiments
pH 7.1
Details EACH CRYSTAL WAS REACTED WITH SUBSTRATE UDP-GLUCOSE IN A SYNTHETIC MOTHER LIQUOR DEVOID OF LITHIUM SULFATE AT PH 7.1.

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 57.2 α = 90
b = 215.4 β = 90
c = 68.9 γ = 90
Symmetry
Space Group P 21 21 2

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 113
Diffraction Detector
Detector Diffraction Type Details Collection Date
AREA DETECTOR SIEMENS HI-STAR SUPPER DOUBLE-FOCUSING MIRRORS WITH NICKEL FOIL 1995
Diffraction Radiation
Monochromator Protocol
-- --
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
-- -- -- -- --

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
1.86 65 97.0 0.063 -- -- 2.5 -- 70581 -- -1.0 19.1

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
-- 1.86 65.0 -- 0.0 70581 206202 -- 97.0 -- -- 0.196 -- --
RMS Deviations
Key Refinement Restraint Deviation
t_gen_planes 0.005
t_trig_c_planes 0.003
t_pseud_angle 28.968
t_incorr_chiral_ct 0.0
t_dihedral_angle_d 16.186
t_angle_deg 2.146
t_bond_d 0.013
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 5405
Nucleic Acid Atoms 0
Heterogen Atoms 44
Solvent Atoms 730

Software

Computing
Computing Package Purpose
SAINT, XSCALIBRE Data Reduction (intensity integration)
TNT V. 5-E Structure Refinement
Software
Software Name Purpose
TNT version: 5E refinement