X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystallization

Crystalization Experiments
pH 8
Details AS FOR 1AW5, EXCEPT ENZYME WAS NOT GEL-FILTERED., pH 8.00

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 102.8 α = 90
b = 102.8 β = 90
c = 168.3 γ = 90
Symmetry
Space Group I 4 2 2

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 100
Diffraction Detector
Detector Diffraction Type Details Collection Date
IMAGE PLATE MARRESEARCH -- 1998-06-15
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE BW7B -- EMBL/DESY, HAMBURG BW7B

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
1.7 14.1 99.5 0.062 -- -- 5.2 -- 45361 -- -- --
High Resolution Shell
Resolution (High) Resolution (Low) Percent Possible (All) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All)
1.7 1.76 99.6 0.385 -- 1.9 4.0 --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
OTHER 1.75 13.1 -- 0.0 45353 -- 2284 99.6 -- 0.259 -- 0.353 RANDOM
RMS Deviations
Key Refinement Restraint Deviation
s_anti_bump_dis_restr 0.016
s_non_zero_chiral_vol 0.038
s_zero_chiral_vol 0.034
s_from_restr_planes 0.329
s_angle_d 0.022
s_bond_d 0.007
Coordinate Error
Parameter Value
Number Disordered Residues 5.0
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 2646
Nucleic Acid Atoms 0
Heterogen Atoms 9
Solvent Atoms 427

Software

Computing
Computing Package Purpose
MOSFLM Data Reduction (intensity integration)
CCP4 (AGROVATA, SCALA) Data Reduction (data scaling)
CCP4 Structure Solution
SHELX Structure Refinement
Software
Software Name Purpose
SHELX refinement
CCP4 model building