X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystallization

Crystalization Experiments
pH 7.5
Details pH 7.50

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 51.3 α = 90
b = 131.6 β = 105.9
c = 63.9 γ = 90
Symmetry
Space Group P 1 21 1

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 100
Diffraction Detector
Detector Diffraction Type Details Collection Date
IMAGE PLATE MAR scanner 300 mm plate -- --
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE BW7B -- EMBL/DESY, Hamburg BW7B

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
1.3 20 95.5 0.075 -- -- 3.6 -- 190229 -- -- 11.8
High Resolution Shell
Resolution (High) Resolution (Low) Percent Possible (All) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All)
1.3 1.31 82.0 0.244 -- 3.4 -- --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
MOLECULAR REPLACEMENT 1.3 20.0 -- 0.0 -- 181046 5653 95.5 -- -- 0.148 0.169 RANDOM
Temperature Factor Modeling
Temperature Factor Value
Mean Isotropic B 15.5
RMS Deviations
Key Refinement Restraint Deviation
p_planar_d 0.04
p_mcangle_it 1.982
p_plane_restr 0.026
p_bond_d 0.018
p_angle_d 0.031
p_scbond_it 3.388
p_chiral_restr 0.128
p_mcbond_it 1.536
p_scangle_it 4.467
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 6086
Nucleic Acid Atoms 0
Heterogen Atoms 97
Solvent Atoms 923

Software

Software
Software Name Purpose
REFMAC refinement
DENZO data reduction
SCALEPACK data scaling
AMoRE phasing