X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystallization

Crystalization Experiments
Method Vapor Diffusion
Details dADP-HslU-HslV, VAPOR DIFFUSION

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 169.99 α = 90
b = 169.99 β = 90
c = 161.32 γ = 120
Symmetry
Space Group P 3 2 1

Diffraction

Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON ALS BEAMLINE 5.0.3 -- ALS 5.0.3

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
-- 3.0 85.0 -- 0.0 -- 46551 4647 85.7 -- 0.2574 0.2574 0.294 RANDOM IN TWINNED SPACE GROUP P622 TWINNING OPERATION : (-H,-K,L)
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 3.0 3.19 -- 779 6401 -- -- 0.016 80.6
Temperature Factor Modeling
Temperature Factor Value
Isotropic Thermal Model RESTRAINED
Mean Isotropic B 52.1
Anisotropic B[1][1] 2.61
Anisotropic B[1][2] 4.27
Anisotropic B[1][3] 0.0
Anisotropic B[2][2] 2.61
Anisotropic B[2][3] 0.0
Anisotropic B[3][3] -5.21
RMS Deviations
Key Refinement Restraint Deviation
c_angle_deg 1.6
c_improper_angle_d 0.83
c_dihedral_angle_d 23.5
c_bond_d 0.009
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 10868
Nucleic Acid Atoms 0
Heterogen Atoms 52
Solvent Atoms 0

Software

Software
Software Name Purpose
X-PLOR model building
CNS refinement version: 1.0
DENZO data reduction
SCALEPACK data scaling
X-PLOR phasing