POP-OUT | CLOSE

An Information Portal to 105339 Biological Macromolecular Structures

SOLUTION NMR
Materials and Methods page
1G03
  •   NMR Eperiment Details Hide
    Representative Model Choice Rationale
    lowest energy  
     
    Spectrometer Info
    Field Strength 800.0
    Manufacturer Bruker
    Model DMX
    Field Strength 600.0
    Manufacturer Bruker
    Model DMX
     
    Sample Conditions
    IDs solution ID:1 condition ID:1
    Sample Contents 0.6 mM HTLV-I Capsid U-15N,13C
    Solvent System 95% H2O, 5% D2O
    Ionic Strength 10mM
    pH 6.0
    Pressure ambient
    Temperature 300
    IDs solution ID:1 condition ID:2
    Sample Contents 0.6 mM HTLV-I Capsid U-15N,13C
    Solvent System 95% H2O, 5% D2O
    Ionic Strength 10mM
    pH 6.0
    Pressure ambient
    Temperature 302
    IDs solution ID:2 condition ID:1
    Sample Contents 0.6 mM HTLV-I Capsid U-15N,13C
    Solvent System 99.9% D2O
    Ionic Strength 10mM
    pH 6.0
    Pressure ambient
    Temperature 300
    IDs solution ID:2 condition ID:2
    Sample Contents 0.6 mM HTLV-I Capsid U-15N,13C
    Solvent System 99.9% D2O
    Ionic Strength 10mM
    pH 6.0
    Pressure ambient
    Temperature 302
    IDs solution ID:3 condition ID:1
    Sample Contents 0.6 mM HTLV-I Capsid U-15N
    Solvent System 95% H2O, 5% D2O
    Ionic Strength 10mM
    pH 6.0
    Pressure ambient
    Temperature 300
    IDs solution ID:3 condition ID:2
    Sample Contents 0.6 mM HTLV-I Capsid U-15N
    Solvent System 95% H2O, 5% D2O
    Ionic Strength 10mM
    pH 6.0
    Pressure ambient
    Temperature 302
    IDs solution ID:4 condition ID:1
    Sample Contents 0.6 mM HTLV-I Capsid U-15N,13C 4% DMPC/DHPC 3:1
    Solvent System 95% H2O, 5% D2O
    Ionic Strength 10mM
    pH 6.0
    Pressure ambient
    Temperature 300
    IDs solution ID:4 condition ID:2
    Sample Contents 0.6 mM HTLV-I Capsid U-15N,13C 4% DMPC/DHPC 3:1
    Solvent System 95% H2O, 5% D2O
    Ionic Strength 10mM
    pH 6.0
    Pressure ambient
    Temperature 302
     
     
  •   NMR Refinement Information Hide
    Refinement
    Method distance geometry simulated annealing
     
  •   NMR Ensemble Information Hide
    Ensemble
    Conformer Selection Criteria structures with the lowest energy
    Conformers Calculated Total Number 100
    Conformers Submitted Total Number 20
     
  •   NMR Experimental Information Hide
    Experiment
    IDs experiment ID:1 solution ID:1 conditons ID:1
    Type 4D_13C/15N-separated_NOESY
    IDs experiment ID:2 solution ID:2 conditons ID:2
    Type 4D_13C-separated_NOESY
    IDs experiment ID:3 solution ID:3 conditons ID:3
    Type 3D_15N-separated_NOESY
     
  •   Additional NMR Experimental Information Hide
    Details
    Detail This structure was determined using dipolar couplings
     
  •   Software and Computing Hide
    NMR Software
    Authors Garrett
    Classification data analysis
    Software Name PIPP/STAPP 4.2.8
    Authors DeLaglio
    Classification data analysis
    Software Name NMRPipe 1.7
    Authors Bruker
    Classification collection
    Software Name XWINNMR 2.5
    Authors Brunger
    Classification refinement
    Software Name X-PLOR 3.840