SOLUTION NMR Experimental Data


Experimental Details
Sample Conditions
Sample Contents2 mM P4 RNA; 100 mM sodium chloride; 10 mM phosphate buffer; 90% H2O, 10% D2O
Solvent90% H2O/10% D2O
Ionic Strength100 mM Na
pH6.5
Pressureambient
Temperature (K)288
Experiment(s):2D NOESY
Sample Contents2 mM P4 RNA; 100 mM sodium chloride; 10 mM phosphate buffer; 99.96% D2O
Solvent99.96% D2O
Ionic Strength100 mM Na
pH6.5
Pressureambient
Temperature (K)288
Experiment(s):2D NOESY, DQF-COSY, 31P-1H-COSY, 13C-1H-HMQC
Sample Contents2 mM P4 RNA; 100 mM sodium chloride; 10 mM magnesium chloride; 10 mM phosphate buffer; 90% H2O, 10% D2O
Solvent90% H2O/10% D2O
Ionic Strength100 mM Na, 10 mM Mg
pH6.5
Pressureambient
Temperature (K)288
Experiment(s):2D NOESY
Sample Contents2 mM P4 RNA; 100 mM sodium chloride; 3 mM hexammine cobalt chloride; 10 mM phosphate buffer; 90% H2O, 10% D2O
Solvent90% H2O/10% D2O
Ionic Strength100 mM Na, 3 mM Co(NH3)6
pH6.5
Pressureambient
Temperature (K)288
Experiment(s):2D NOESY
Spectrometer Information
Manufacturer Model Field Strength
Bruker AMX 600.0
Bruker DRX 500.0
NMR Refinement
Method restrained molecular dynamics; simulated annealing
Details The average structure is based on superposition of nine converged structures after refinement. The average RMS deviation between the ensemble and the average structure is 1.8 Angstrom. A total of 266 NOE-derived distance constraints, 164 dihedral restraints and 48 distance restraints from hydrogen bonds were used in the refinement
NMR Ensemble Information
Conformers Submitted Total Number 1
Representative Model Choice Rationale
1 minimized average structure
Additional NMR Experimental Information
1 This structure was determined using standard 2D homonuclear techniques and 13C and 31P heteronuclear techniques at natural abundance
Computation: NMR Software
# Classification Software Name Author
1 collection version: 3.1 XWINNMR Bruker
2 processing version: 95.0 FELIX MSI
3 structure solution version: 3.841 X-PLOR Brunger
4 refinement version: 3.841 X-PLOR Brunger