X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystallization

Crystalization Experiments
Method Vapor Diffusion Hanging Drop
pH 7.5
Temperature 291.0
Details 10% PEG-3350, 100 MM HEPES, PH 7.5, 20 MM NICL2 , VAPOR DIFFUSION, HANGING DROP, temperature 291K

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 62.33 α = 90
b = 62.33 β = 90
c = 91.22 γ = 120
Symmetry
Space Group P 61

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 100
Diffraction Detector
Detector Diffraction Type Details Collection Date
IMAGE PLATE MARRESEARCH MIRROR 1999-06-01
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X11 -- EMBL/DESY, Hamburg X11

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
1.48 20 93.9 0.026 -- -- 4.4 146199 33345 0.0 0.0 34.0
High Resolution Shell
Resolution (High) Resolution (Low) Percent Possible (All) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All)
1.47 1.55 90.0 0.214 -- 5.22 3.2 5853

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
MOLECULAR REPLACEMENT 1.48 31.0 0.0 0.0 33452 33452 1673 94.2 0.179 0.178 0.178 0.228 RANDOM
RMS Deviations
Key Refinement Restraint Deviation
s_non_zero_chiral_vol 0.06
s_angle_d 0.04
s_bond_d 0.01
s_approx_iso_adps 0.0
s_from_restr_planes 0.027
s_rigid_bond_adp_cmpnt 0.0
s_similar_dist 0.0
s_anti_bump_dis_restr 0.01
s_similar_adp_cmpnt 0.06
s_zero_chiral_vol 0.04
Coordinate Error
Parameter Value
Number Disordered Residues 1.0
Occupancy Sum Hydrogen 0.0
Occupancy Sum Non Hydrogen 1609.0
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 1391
Nucleic Acid Atoms 0
Heterogen Atoms 62
Solvent Atoms 209

Software

Software
Software Name Purpose
AMoRE phasing
SHELXL-97 refinement
MAR data reduction
XDS data scaling