SOLUTION NMR Experimental Data


Experimental Details
Sample Conditions
Spectrometer Information
Manufacturer Model Field Strength
Bruker AMX600 600.0
NMR Refinement
Method NAB TO GENERATE A FAMILY OF CONFOMRERS THAT SAMPLE A WIDE RANGE OF CONFORMATIONAL SPACE. RESTRAINED MOLECULAR DYNAMICS TO GENERATE A RANGE OF STARTING STRUCTURES FOR DSI. PAIRS OF DNA AND DSI STRUCTURES WERE THEN DOCKED AND ITERATIVELY REFINED BY A SERIES OF RESTRAINED MOLECULAR DYNAMICS CALCULATIONS.
Details REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE.
NMR Ensemble Information
Conformer Selection Criteria LOWEST RESTRAINT VIOLATIONS
Conformers Calculated Total Number 40
Conformers Submitted Total Number 20
Representative Model Choice Rationale
1 n/a
Additional NMR Experimental Information
1 THE STRUCTURE WAS DETERMINED USING HOMONUCLEAR 1H NMR DATA. RESONANCE ASSIGNMENTS WERE AIDED BY A 1H - 13C HSQC EXPERIMENT PERFORMED AT NATURAL ISOTOPE ABUNDANCE.
Computation: NMR Software
# Classification Software Name Author
1 refinement version: 5.1 AMBER PEARLMAN,CASE,CALDWELL,ROSS,CHEATHAM, FERGUSON,SEIBEL,SINGH,WEINER,KOLLMAN
2 structure solution version: 97 FELIX --
3 structure solution version: 2.1 NAB --
4 structure solution version: 5.21 MARDIGRAS --
5 structure solution version: 5.1 AMBER --