X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystallization

Crystalization Experiments
pH 6.5
Details pH 6.5

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 72.7 α = 90
b = 48.9 β = 106.7
c = 61.1 γ = 90
Symmetry
Space Group C 1 2 1

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 100
Diffraction Detector
Detector Diffraction Type Details Collection Date
IMAGE PLATE RIGAKU -- 1996-07-01
Diffraction Radiation
Monochromator Protocol
GRAPHITE SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
ROTATING ANODE RIGAKU -- -- --

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
1.8 30 90.6 -- 0.044 -- 2.5 -- 17046 -- -- --
High Resolution Shell
Resolution (High) Resolution (Low) Percent Possible (All) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All)
1.8 1.86 86.1 -- 0.337 3.3 -- --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
OTHER 1.8 20.0 -- 0.0 -- 18683 789 90.6 -- -- 0.18 0.233 RANDOM
Temperature Factor Modeling
Temperature Factor Value
Mean Isotropic B 15.6
RMS Deviations
Key Refinement Restraint Deviation
p_special_tor 15.0
p_staggered_tor 18.8
p_planar_tor 3.3
p_xyhbond_nbd 0.167
p_multtor_nbd 0.25
p_bond_d 0.007
p_angle_d 0.024
p_planar_d 0.023
p_mcbond_it 1.068
p_mcangle_it 1.658
p_scbond_it 1.31
p_scangle_it 2.101
p_plane_restr 0.0183
p_chiral_restr 0.085
p_singtor_nbd 0.171
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 1692
Nucleic Acid Atoms 0
Heterogen Atoms 49
Solvent Atoms 199

Software

Computing
Computing Package Purpose
HKL, DENZO Data Reduction (intensity integration)
SCALEPACK Data Reduction (data scaling)
REFMAC Structure Refinement
Software
Software Name Purpose
REFMAC refinement