POP-OUT | CLOSE

An Information Portal to 109093 Biological Macromolecular Structures

X-RAY DIFFRACTION
Materials and Methods page
1CC0
  •   Crystallization Hide
    Crystallization Experiments
    Method VAPOR DIFFUSION, SITTING DROP
    pH 5.3
    Temperature 293.0
    Details CRYSTALS GROWN BY VAPOR DIFFUSION IN A SITTING DROP USING EQUAL VOLUMES OF PROTEIN AND RESERVOIR. CRYSTALLIZATION OCCURED OVER A PERIOD OF SEVERAL DAYS AT 20 DEGREE CELSIUS. PROTEIN (15 MG/ML) WAS IN 25MM TRIS-HCL, PH=8.0, 100MM NACL, 5MM MGCL2. RESERVOIR CONTAINED: 51% SATURATED AMMONIUM SULFATE, 100 MM SODIUM ACETATE, PH=5.3, VAPOR DIFFUSION, SITTING DROP, temperature 293K
     
  •   Crystal Data Hide
    Unit Cell
    Length    (Å) Angle    (°)
    a = 139.3 α = 90
    b = 139.3 β = 90
    c = 253.1 γ = 120
     
    Space Group
    Space Group Name:    P 65 2 2
     
     
  •   Diffraction Hide
    Diffraction Experiment
    Diffrn ID 1
    Data Collection Temperature 100
     
    Diffraction Detector
    Detector IMAGE PLATE
    Type MARRESEARCH
    Details MIRRORS
    Collection Date 1998-11-15
     
    Diffraction Radiation
    Diffraction Protocol SINGLE WAVELENGTH
     
    Diffraction Source
    Source SYNCHROTRON
    Type EMBL/DESY, HAMBURG BEAMLINE BW7B
    Wavelength 0.8373
    Site EMBL/DESY, HAMBURG
    Beamline BW7B
     
     
  •   Refinement Data Hide
    Reflection Details
    Resolution(High) 4
    Resolution(Low) 40
    Number Reflections(Observed) 12817
    Percent Possible(Observed) 99.1
    Redundancy 10.2
     
    High Resolution Shell Details
    Resolution(High) 4.0
    Resolution(Low) 4.09
    Percent Possible(All) 99.6
    R-Sym I(Observed) 0.193
     
     
  •   Refinement Hide
    Refinement Statistics
    Structure Solution Method MAD
    reflnsShellList 5.0
     
    Temperature Factor Modeling
    Data Not Available
     
    Number of Non-Hydrogen Atoms Used in Refinement
    Protein Atoms 5116
    Nucleic Acid Atoms 0
    Heterogen Atoms 58
    Solvent Atoms 0
     
     
  •   Software and Computing Hide
    Computing
    Data Reduction (intensity integration) DENZO
    Data Reduction (data scaling) SCALEPACK
    Structure Solution CCP4, MLPHARE, AMORE
    Structure Refinement O
     
    Software
    refinement O
    model building AMoRe
    model building MLPHARE
    model building CCP4