X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystallization

Crystalization Experiments
Method Vapor Diffusion Hanging Drop
pH 9.2
Temperature 293.0
Details PEG 6000, SODIUM CHLORIDE, CALCIUM CHLORIDE, TRIS, GLYCINE, pH 9.2, VAPOR DIFFUSION, HANGING DROP, temperature 293K

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 60.59 α = 90
b = 158.72 β = 90
c = 221.39 γ = 90
Symmetry
Space Group C 2 2 21

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 100
Diffraction Detector
Detector Diffraction Type Details Collection Date
CCD CUSTOM-MADE -- 1997-09-07
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON ESRF BEAMLINE D2AM -- ESRF D2AM

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
2.13 39.9 80.4 0.067 -- -- 3.7 60474 48621 0.0 0.0 29.8
High Resolution Shell
Resolution (High) Resolution (Low) Percent Possible (All) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All)
2.13 2.16 22.2 0.22 -- -- 1.6 --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
-- 2.2 20.0 0.0 0.0 46479 46479 4720 76.1 0.224 0.224 0.223 0.286 RANDOM
RMS Deviations
Key Refinement Restraint Deviation
x_bond_d 0.007
x_angle_deg 2.537
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 7008
Nucleic Acid Atoms 0
Heterogen Atoms 78
Solvent Atoms 548

Software

Computing
Computing Package Purpose
IN-HOUSE VERSION OF XDS Data Reduction (intensity integration)
BIOMOL Data Reduction (data scaling)
AMORE Structure Solution
REFMAC, X-PLOR 3.843 Structure Refinement
Software
Software Name Purpose
X-PLOR3.843 refinement
REFMAC refinement
AMORE model building
BIOMOL data reduction
CUSTOM-MADE version: VERSION OF XDS data collection