X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystallization

Crystalization Experiments
pH 5
Details pH 5

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 89.88 α = 90
b = 92.11 β = 90
c = 131.63 γ = 90
Symmetry
Space Group P 21 21 21

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 100
Diffraction Detector
Detector Diffraction Type Details Collection Date
AREA DETECTOR SIEMENS HI-STAR COLLIMATOR 1997-01-15
Diffraction Radiation
Monochromator Protocol
GRAPHITE(002) --
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
-- SIEMENS -- -- --

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
2.4 20 79.0 -- 0.122 -- 4.0 -- 41872 -- -- --
High Resolution Shell
Resolution (High) Resolution (Low) Percent Possible (All) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All)
2.4 2.51 60.0 -- -- 1.4 -- --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
MOLECULAR REPLACEMENT 2.4 20.0 -- -- 34202 34202 -- 79.0 0.2 -- -- -- --
Temperature Factor Modeling
Temperature Factor Value
Isotropic Thermal Model TNT BCORREL
RMS Deviations
Key Refinement Restraint Deviation
t_bond_d 0.021
t_trig_c_planes 0.022
t_gen_planes 0.026
t_dihedral_angle_d 20.46
t_angle_deg 5.132
t_it 8.49
t_nbd 0.058
t_incorr_chiral_ct 0.0
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 7236
Nucleic Acid Atoms 0
Heterogen Atoms 306
Solvent Atoms 306

Software

Software
Software Name Purpose
AMoRE phasing
TNT refinement version: 5E
XENGEN data reduction
XENGEN data scaling