Macromolecule Annotations for the Entities in PDB 2DY4

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A1-375 d2dy4a1 Alpha and beta proteins (a/b) Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Exonuclease domain of family B DNA polymerases Bacteriophage RB69 [TaxId: 12353]
A376-902 d2dy4a2 Multi-domain proteins (alpha and beta) DNA/RNA polymerases DNA/RNA polymerases DNA polymerase I Family B DNA polymerase Bacteriophage RB69 [TaxId: 12353]
B1-375 d2dy4b1 Alpha and beta proteins (a/b) Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Exonuclease domain of family B DNA polymerases Bacteriophage RB69 [TaxId: 12353]
B376-902 d2dy4b2 Multi-domain proteins (alpha and beta) DNA/RNA polymerases DNA/RNA polymerases DNA polymerase I Family B DNA polymerase Bacteriophage RB69 [TaxId: 12353]
C1-375 d2dy4c1 Alpha and beta proteins (a/b) Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Exonuclease domain of family B DNA polymerases Bacteriophage RB69 [TaxId: 12353]
C376-900 d2dy4c2 Multi-domain proteins (alpha and beta) DNA/RNA polymerases DNA/RNA polymerases DNA polymerase I Family B DNA polymerase Bacteriophage RB69 [TaxId: 12353]
D1-375 d2dy4d1 Alpha and beta proteins (a/b) Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Exonuclease domain of family B DNA polymerases Bacteriophage RB69 [TaxId: 12353]
D376-897 d2dy4d2 Multi-domain proteins (alpha and beta) DNA/RNA polymerases DNA/RNA polymerases DNA polymerase I Family B DNA polymerase Bacteriophage RB69 [TaxId: 12353]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
E,G,I,K 5'-D(*CP*GP*(CTG)P*GP*GP*AP*AP*TP*GP*A*CP*AP*GP*CP*CP*GP*CP*G)- 3' (2DY4:E,G,I,K)
  • none
  • none
  • none
F,H,J,L 5'-D(*GP*CP*GP*GP*CP*TP*GP*T*CP*AP*TP*TP*CP*CP*A)- 3' (2DY4:F,H,J,L)
  • none
  • none
  • none
A,B,C,D DNA polymerase (2DY4:A,B,C,D)
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description