Primary Citation PubMed: 3430615
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Lactate production yield from engineered yeasts is dependent from the host background, the lactate dehydrogenase source and the lactate export.
(2006) Microb Cell Fact 5
PubMed: 16441897 | PubMedCentral: PMC1373645 | DOI: 10.1186/1475-2859-5-4
LDH activity was assayed as micromoles of NADH oxidized per min, per mg of total protein extract, at 340 nm, 25°C. Simulations The computational investigation has been carried out using the X-... ay structure of Ldh from Squalus acanthias , chosen because both of the holo and apo structures are available (pdb codes: 3LDH, 6LDH, respectively.
Publication Year: 2006
New enumeration algorithm for protein structure comparison and classification.
(2013) BMC Genomics 14 Suppl 2
PubMed: 23445440 | PubMedCentral: PMC3582452 | DOI: 10.1186/1471-2164-14-S2-S1
Refer to the protein structure and the corresponding mixed graph representation in Figures 1 for protein with ID: 6ldh.
Publication Year: 2013
Structural characterization of the apo form and NADH binary complex of human lactate dehydrogenase.
(2014) Acta Crystallogr D Biol Crystallogr 70
PubMed: 24816116 | PubMedCentral: PMC4014127 | DOI: 10.1107/S1399004714005422
The few eukaryotic LDH-A apo structures that have been solved so far are those from ice mackerel (71% sequence identity; PDB entry 2v65 ; Coquelle et al. , 2007 ▶ ) and spiny dogfish (79% sequ... nce identity; PDB entry 6ldh ; Abad-Zapatero et al. , 1987 ▶ ).
( b ) Superposition of the human LDH-A apo form (purple) with LDH-A apo structures from spiny dogfish (cyan; PDB entry 6ldh ; 0.45 Å r.m.s.d., 79% sequence identity; Abad-Zapatero et al. , 1987 ▶ ) and ice mackerel (light blue; PDB entry 2v65 ; 0.6 Å r.m.s.d., 71% sequence identity; Coquelle et al. , 2007 ▶ ).
The closest LDH-A apo structures available at present are from Squalus acanthias (spiny dogfish; PDB entry 6ldh ; 79.9% sequence identity; Abad-Zapatero et al. , 1987 ▶ ) and from Champsocephalus gunnari (ice mackerel; PDB entry 2v65 ; 71.5% sequence identity; Coquelle et al. , 2007 ▶ ).
Publication Year: 2014
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