Citations in PubMed

Primary Citation PubMed: 24880687 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 1

Citations in PubMed

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PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

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Structures of HIV-1 RT-RNA/DNA ternary complexes with dATP and nevirapine reveal conformational flexibility of RNA/DNA: insights into requirements for RNase H cleavage.

(2014) Nucleic Acids Res 42

PubMed: 24880687 | PubMedCentral: PMC4081091 | DOI: 10.1093/nar/gku487

ACCESSION NUMBERS The atomic coordinates and structure factors for the structures of RT-RNA/DNA-dATP, RT-RNA/DNA-NVP, RT-gapRNA/DNA-NVP and RT-bulgeRNA/DNA-NVP complexes are deposited in Protein Data ... ank (PDB) under accession numbers 4PQU, 4PUO, 4Q0B and 4PWD, respectively.

X-ray data and refinement statistics   RT-RNA/DNA- dATP RT-RNA/DNA-NVP RT-gapped RNA/DNA-NVP RT-bulged RNA/ DNA-NVP PDB ID 4PQU 4PUO 4Q0B 4PWD Data collection         Space group P2 1 P2 1 P2 1 P2 1 Cell dimensions         a , b , c (Å) 89.44, 128.29, 130.68 89.74, 132.13, 141.96 89.72, 131.05, 141.63 89.68, 130.77, 141.87 α, β, γ (°) 90, 101.76, 90 90, 100.63, 90 90, 100.69, 90 90, 100.75, 90 Resolution (Å) 50.0–2.5 (2.54 –2.5)* 50.0–2.9 (2.95 – 2.9) 50–3.3 (3.36 – 3.3) 50.0 – 3.0 (3.05 – 3.0) R merge 0.102 (0.532) 0.093 (0.687) 0.142 (0.670) 0.097 (0.669) I / σ( I ) 9.7 (1.8) 8.8 (1.3) 7.0 (1.4) 10.3 (1.6) Completeness (%) 98.4 (96.7) 98.8 (94.3) 98.6 (97.6) 96.2 (90.9) Redundancy 3.6 (3.0) 3.5 (2.7) 3.0 (2.5) 3.6 (3.0)           Refinement         Resolution (Å) 40.5 – 2.5 46.5 – 2.9 46.4 – 3.3 44.7 – 3.0 Cut-off criteria F ≤ 1.4 F ≤ 0 F ≤ 0 F ≤ 0 No.

Publication Year: 2014