Primary Citation PubMed: 23679862
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The TFE-induced transient native-like structure of the intrinsically disordered ???? domain of Escherichia coli RNA polymerase.
(2014) Eur Biophys J 43
PubMed: 25261014 | PubMedCentral: PMC4236625 | DOI: 10.1007/s00249-014-0987-4
2011 ) and the structure of whole σ 70 in the RNAP holoenzyme of E. coli (4IGC) (Murakami 2013 ), as well as its complexes with small-mass ligands (4KN7, 4KN4, 4KMU and 4JK2, 4JK1) (Molodtsov ... t al.
Publication Year: 2014
PubMed ID is not available.
Published in 2015
Structure PDB Reference Source Core enzyme–rifampin 1YNN [ 80 ] B Holoenzyme–rifampin 4KMU [ 81 ] A Holoenzyme–rifampin derivatives 2A68, 2A69 [ 83 ] B Holoenzyme–rifam... in derivatives 4KN4, 4KN7 [ 81 ] A Holoenzyme–ppGpp 1SMY [ 76 ] B Holoenzyme–ppGpp 4JK1, 4JKR [ 74 , 75 ] A Holoenzyme–pppGpp 4JK2 [ 74 ] A Core enzyme–sorangicin 1YNJ [ 82 ] B Holoenzyme–streptolydigin 1ZYR, 2A6H [ 34 , 84 ] B Elongation complex–streptolydigin 2PPB [ 42 ] B Holoenzyme–myxopyronin 3DXJ, 3EQL [ 85 , 86 ] B Holoenzyme–myxopyronin 4YFX [ 87 ] A Holoenzyme–GE23077 4MQ9 [ 41 ] B Holoenzyme–DNA–GE23077 4OIN, 4OIP [ 41 ] B Holoenzyme–DNA–GE23077/rifamycin SV 4OIR [ 41 ] B Holoenzyme–salinamide A 4MEX [ 37 ] A Holoenzyme–squaramide 4YFK, 4YFN [ 87 ] A A: Escherichia coli ; B: Thermus aquatics/Thermusthermophilus ; * All structures in this table were determined by X-ray crystallography method.
Structures of the RNAP–rifampin complex ( T. aquaticus core enzyme, PDB: 1YNN; E. coli holoenzyme, PDB: 4KMU) provided a detailed view of the interaction between rifampin and the β subunit and explained how rifampin blocks RNA extension [ 80 , 81 ].
Publication Year: 2015
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