Primary Citation PubMed: 23667707
Citations in PubMed
This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.
Data mentions are occurrences of PDB IDs in the full text articles from the
PubMedCentral Open Access Subset
of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed.
Article titles can be filtered by keywords and sorted by year.
Signal transduction pathways in the pentameric ligand-gated ion channels.
(2013) PLoS One 8
PubMed: 23667707 | PubMedCentral: PMC3648548 | DOI: 10.1371/journal.pone.0064326
( b ) The C loop region of the crystal structure of the NQN mutant (orange; PDB code: 4IRE), showing an outward movement of the C loop in comparison with the wild type GLIC (yellow and gray; PDB code ... F8H) due to removal of salt bridges in the mutant.
In order to understand the functional role of these salt bridges, we performed the NQN mutation (D91N, E177Q, D178N) to eliminate the salt bridges, crystallized the NQN mutant, and solved its structure (PDB: 4IRE) to a resolution of 3.19 Å ( Table 1 ).
Reflections (test set) 61291 (999) R work /R free 0.204/0.243 Non-H protein (ligand) atoms 12686 (754) <B-factors> (Å 2 ) Protein 87.3 Detergents 107.5 Lipids 121.0 Solvent 93.5 R.M.S. Deviations Bond lengths (Å) 0.009 Bond angles (degrees) 1.3 Rotamer outliers (%) 5.3 Ramachandran outliers (%) 0.19 Ramachandran favored (%) 97.17 PDB code 4IRE a Values in the parentheses are for highest-resolution shell.
Publication Year: 2013
The RCSB PDB (citation) is managed by two members of the Research Collaboratory for Structural Bioinformatics: Rutgers and UCSD/SDSC
RCSB PDB is a member of the
The RCSB PDB is funded by a grant (DBI-1338415) from the
National Science Foundation, the
National Institutes of Health, and the
US Department of Energy.