Citations in PubMed

Primary Citation PubMed: 24887147 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 1

Citations in PubMed

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PDB ID Mentions in PubMed Central

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Structural and mutagenic analysis of the RM controller protein C.Esp1396I.

(2014) PLoS One 9

PubMed: 24887147 | PubMedCentral: PMC4041747 | DOI: 10.1371/journal.pone.0098365

The three wild type loop conformations observed in 3G5G and 4I6R are shown in the same colours as in Figure 5 and are translucent.

Coordinates and structure factors have been deposited in the Protein Data Bank with accession numbers 4I6R; 4I6T; 4IA8; 4I6U; 4F8D; 4FBI; 4FN3; 4IVZ Introduction Restriction-modification (RM) systems encode a restriction endonuclease (ENase) and a DNA methyltransferase (MTase).

Protein Wild Type T36A Y37A Y37F R46A R46A S52A Y37A-19O M PDB code 4I6R 4I6T 4IA8 4I6U 4F8D 4FBI 4FN3 4IVZ Space Group P1 P6 5 P1 P2 1 2 1 2 1 C2 P3 2 C2 P2 1 Cell Dimensions: a, b, c (Å) 34.76 34.78 41.86 65.45 65.45 72.29 34.26 34.28 41.12 48.61 81.85 135.08 46.40 51.00 74.60 65.33 65.33 71.38 46.59 51.32 74.38 47.50 146.70 47.80 α, β, γ (°) 110.47 105.60 96.00 90 90 120 104.44 108.92 97.42 90 90 90 90 96.60 90 90 90 120 90 95.46 90 90 93.21 90 Solvent content (%) 37.2 40.1 37.2 37.5 36.1 36.3 36.5 45.0 Monomers in ASU 2 2 2 6 2 4 2 4 (+4 DNA) Data Collection: Beamline DLS-I04-1 DLS-I04-1 DLS-I04-1 DLS-I04-1 DLS-I02 DLS-I04-1 DLS-I02 DLS-I04-1 Wavelength (Å) 0.92 0.92 0.92 0.92 0.98 0.92 0.98 0.98 Resolution (Å) 1.4 2.0 1.9 2.0 1.5 1.5 1.8 3.1 No.

Top panel shows the asymmetric unit of the C.Esp1396I high resolution wild type X-ray crystal structure (4I6R) in orange with a symmetry related dimer in light orange.

The two alternative C.Esp1396I loop positions in 3G5G are shown in light blue (conformation I) and light green (conformation II) and the high resolution wild type loop position from 4I6R is shown in orange (III).

The high resolution wild type crystal structure (4I6R) is shown in orange (one monomer dark and one light) and the low resolution wild type is shown in blue/silver (one monomer dark and one light).

ACCESSION NUMBERS: Coordinates and structure factors have been deposited in the Protein Data Bank with accession numbers 4I6R; 4I6T; 4IA8; 4I6U; 4F8D; 4FBI; 4FN3; 4IVZ.

Publication Year: 2014