Citations in PubMed

Primary Citation PubMed: 24056934 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 1

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

  • 3 per page
  • 5 per page
  • 10 per page
  • view all
  • Publication Year
  • Ascending
  • Descending

Discovery of new enzymes and metabolic pathways by using structure and genome context.

(2013) Nature 502

PubMed: 24056934 | PubMedCentral: PMC3966649 | DOI: 10.1038/nature12576

The unliganded structure used in docking (PDB 2PMQ) and the later determined liganded structure (PDB 4H2H) are shown in magenta and cyan, respectively.

The final structure has 98.6% of its residues in favored regions of the Ramachandron plot, and 0.0% in dissallowed regions (4H2H, Supplemental Table S4 ).

The liganded structure (4H2H) superimposes with the APO structure (subunit A vs. subunit A) with an RMSD of 0.25 Å over 366 aligned Cαs with no substantial changes to the structure upon ligand binding.

Data deposition The atomic coordinates and structure factors for APO Hyp-B 2-epimerase (HpbD; PDBID:2PMQ) and tHyp-B-liganded HpbD (PDBID:4H2H) have been deposited in the Protein Data Bank, .

Publication Year: 2013