Primary Citation PubMed: 22987782
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Comprehensive analysis of the HEPN superfamily: identification of novel roles in intra-genomic conflicts, defense, pathogenesis and RNA processing.
(2013) Biol Direct 8
PubMed: 23768067 | PubMedCentral: PMC3710099 | DOI: 10.1186/1745-6150-8-15
Currently, structures are available for Csx1 from Sulfolobus solfataricus (PDB: 2i71) and Pyrococcus furiosus (PDB: 4eog) [ 62 ] and the P. furiosus Csx1 protein has been shown to bind DNA [ 62 ].
In operon with ParA/Soj ATPase of SIMIBI-type GTPase fold Bacteria CRISPR-Cas Csx1( MJ1666) Yes A dyad of HEPN domains fused to a Rossmann fold domain (PF09455) Archaea > Bacteria; PDB:2i71, 4EOG Csx1(TM1812) Yes HEPN fused to a Rossmann fold (PF09455), and a few other novel domains Bacteria; Csm6 Yes HEPN fused to Csm6 (PF09659) and a helical domain bacteria; Csm6 (Cas_Cas02710) Yes HEPN fused to Csm6 (PF09670) Bacteria > Archaea; Other families Ymh (PF09509) Yes Solos and fusions to pMORC, AbiJ-NTD1 and AbiTii domain.
Publication Year: 2013
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