Primary Citation PubMed: 23322043
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A structural basis for streptomycin-induced misreading of the genetic code.
(2013) Nat Commun 4
PubMed: 23322043 | PubMedCentral: PMC3552334 | DOI: 10.1038/ncomms2346
We generated complexes with streptomycin, hexa-uridine mRNA, and cognate ASL GAA Phe (data set Phe, Protein Data Bank (PDB) accession code 4DR5) or near-cognate ASLs ( ASL GAG Leu 2 , data set Leu, PD... accession code 4DR6, and ASL GGA Ser , data set Ser, PDB accession code 4DR7) by soaking these compounds into 30S subunit crystals.
Accession codes Coordinates and structure factors have been deposited in the Protein Data Base under accession codes 4DR1, 4DR2, 4DR3, 4DR4, 4DR5, 4DR6, and 4DR7 for data sets Apo, Par, Strep, MAP, Sm-ASL GAA Phe -mRNA, Sm-ASL GAG Leu 2 -mRNA, and Sm-ASL GGA Ser -mRNA, respectively.
Publication Year: 2013
Quantification of free ligand conformational preferences by NMR and their relationship to the bioactive conformation.
(2013) Bioorg Med Chem 21
PubMed: 23886813 | PubMedCentral: PMC3744816 | DOI: 10.1016/j.bmc.2013.06.056
4.2 Comparison with protein/RNA-streptomycin complex structures The conformation of streptomycin bound to the bacterial 30S ribosomal subunit (its natural target), has been determined to 3.0 &... x000c5; (PDB code 1FJG ) 45,46 and to ∼3.5 Å (PDB codes 4DR3 and 4DR5 –7) in a range of apo - and tRNA-bound states.
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