Primary Citation PubMed: 22768308
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Fluorophore labeled kinase detects ligands that bind within the MAPK insert of p38? kinase.
(2012) PLoS One 7
PubMed: 22768308 | PubMedCentral: PMC3388095 | DOI: 10.1371/journal.pone.0039713
As revealed by protein X-ray crystallography of the corresponding amine analog 8b (PDB code 4DLJ), the phenylethylene moiety extends further into the hydrophobic pocket when compared to 1b , suggestin... that the deeper occupancy of this hydrophobic sub-pocket by the large substituent in the 4-position likely contributes to the increased affinity of 8a ( Figure 4B ).
p38αwith 1b (4DLI) p38αwith 8b (4DLJ) Data collection Space group P2 1 2 1 2 1 P2 1 2 1 2 1 Cell dimensions a , b , c (Å) 66.26, 74.22, 77.92 65.98, 74.51, 78.32 α, β, γ (°) 90.00, 90.00, 90.00 90.00, 90.00, 90.00 Resolution (Å) 45.0–1.91 (2.00–1.91) a 45.0–2.60 (2.70–2.60) a R sym or R merge (%) 4.0 (40.1) 7.6 (35.9) I /σ I 22.0 (4.0) 17.0 (4.3) Completeness (%) 99.5 (99.8) 99.8 (99.7) Redundancy 3.97 (4.03) 4.34 (3.36) Refinement Resolution (Å) 41.7–1.91 39.2–2.60 No.
Publication Year: 2012
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