Citations in PubMed

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PDB ID Mentions in PubMed Central Article count: 2

Citations in PubMed

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PDB ID Mentions in PubMed Central

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Pilicides inhibit the FGL chaperone/usher assisted biogenesis of the Dr fimbrial polyadhesin from uropathogenic Escherichia coli.

(2013) BMC Microbiol 13

PubMed: 23758700 | PubMedCentral: PMC3706281 | DOI: 10.1186/1471-2180-13-131

The sequence and structural analyses of the DraB chaperone (PDB ID: 4DJM) reveal that it possesses all the marks characteristic for the FGL Caf1M-like chaperones (Figure  4 A): 1) the β... -strands F1 and G1 are connected by the long loop, which is composed of 15 residues; 2) the G1 donor strand contains five bulky hydrophobic residues; 3) the N-terminal subunit binding motif including the β-strand A1 with three bulky hydrophobic residues is very long and contains 26 residues, whereas the PapD has only 7 residues, 2 of them bulky hydrophobic; 4) the conserved disulfide bond stabilizes a massive F1-loop-G1 hairpin; 5) the three conserved residues, namely, K105, D107 and W110, are located in the loop connecting the β-strands F1 and G1 [ 12 , 13 ].

( A ) Characteristic elements of the DraB structure (PDB ID: 4DJM) specific to the FGL chaperones in relation to the PapD (PDB ID: 2WMP), - the representative of the FGS subfamily.

Publication Year: 2013


PubMed ID is not available.

Published in 2015

PubMedCentral: PMC4461329

Molecular replacement was attempted with AMoRe (Navaza, 2001 ▶ ), MOLREP (Vagin & Teplyakov, 2010 ▶ ), Phaser (McCoy, 2007 ▶ ) and within MR_Rosetta (Terwilliger et al.... , 2012 ▶ ) using all known structures of chaperone–usher pathway chaperones as search models: CupB2 (PDB entry 3q48 ; Cai et al. , 2011 ▶ ), SafB (PDB entry 2co7 ; Remaut et al. , 2006 ▶ ), DraB (PDB entry 4djm ; Z. Dauter, R. Piatek, M. Dauter & A. Brzuszkiewicz, unpublished work), FimC (PDB entry 1klf ; Hung et al. , 2002 ▶ ), Caf1M (PDB entry 4ay0 ; Yu et al. , 2012 ▶ ), PapD (PDB entry 2xg5 ; Chorell et al. , 2010 ▶ ), CfaA (PDB entry 4ncd ; Bao et al. , 2014 ▶ ), SfaE (PDB entry 1l4i ; Knight et al. , 2002 ▶ ) and FaeE (PDB entry 3gfu ; Van Molle et al. , 2009 ▶ ).

Publication Year: 2015