Citations in PubMed

Primary Citation PubMed: 9760165 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 2

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

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Lignin triggers irreversible cellulase loss during pretreated lignocellulosic biomass saccharification.

(2014) Biotechnol Biofuels 7

PubMed: 25530803 | PubMedCentral: PMC4272552 | DOI: 10.1186/s13068-014-0175-x

CBMs for CBH I [PDB:1cbh] and EG I [PDB:4bmf] were scored from previously solved structures.

Publication Year: 2014


PubMed ID is not available.

Published in 2014

PubMedCentral: PMC4364333

Molecular modeling A PSI-BLAST (Position-Specific Iterated Basic Local Alignment Search Tool) [ 39 ] search with default parameters was performed against the Protein Data Bank (PDB), and GH10 xylanase... from Fusarium oxysporum (PDB code 3U7B [ 5 ]) and a cellulose-binding domain (CBD) of endoglucanase I from Trichoderma reesei (PDB code 4BMF [ 20 ]) were selected for building a structural model of the XYN10A by comparative modeling techniques with the program MODELLER9v12 [ 40 ].

MpXyn10A also has a cellulose-binding domain, and for this the cellulose-binding module (CBM1) of the endoglucanase I from Trichoderma reesei (PDB code 4BMF [ 20 ]) was used as a template.

The templates thus identified, GH10 XYLANASE from Fusarium oxysporum (PDB code 3U7B [ 5 ]) and a cellulose-binding domain (CBD) of endoglucanase I from Trichoderma reesei (PDB code 4BMF [ 11 ]) were used for building a structural model of the XYN10A by comparative modeling techniques with the program MODELLER9v12 [ 21 ].

Publication Year: 2014