Primary Citation PubMed: 23151482
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Structural visualization of key steps in human transcription initiation.
(2013) Nature 495
PubMed: 23446344 | PubMedCentral: PMC3612373 | DOI: 10.1038/nature11991
( c ) Crystal structures for TBP-TFIIA-DNA (PDB ID: 1NVP), TBP-TFIIB-DNA (PDB ID: 1C9B), Pol II-TFIIB (PDB ID: 4BBR), RAP30/74 dimerization domain (PDB ID: 1F3U 16 ), RAP30 WH domain (PDB ID: 1BBY 49 ... , and modeled B-form DNA (globally bent between −23 and +7 by 18°) are shown docked into transparent EM densities.
Publication Year: 2013
Activation of a chimeric Rpb5/RpoH subunit using library selection.
(2014) PLoS One 9
PubMed: 24489922 | PubMedCentral: PMC3906176 | DOI: 10.1371/journal.pone.0087485
C: Close-up of a putative salt bridge between K197 of Rpb5 and D1013 of RpbA from S. cerevisiae (ID code in the Protein Data Bank: 4BBR).
Publication Year: 2014
Architecture of the Saccharomyces cerevisiae RNA polymerase I Core Factor complex.
(2014) Nat Struct Mol Biol 21
PubMed: 25132180 | PubMedCentral: PMC4219626 | DOI: 10.1038/nsmb.2873
Sequence and templates used for structural modeling: Rrn7 residues 1-375 aligned with yeast TFIIB residues 1-345 (Pdb, 4bbr) 64 , Rrn6-WD40 residues 163-559 aligned with human Nuclear pore subunit Nup... 14 residues 1-411 (Pdb, 2oit) 65 , and Rrn11-TPR was aligned in two overlapping segments 129-320 and 208-401 were aligned to Anaphase-promoting complex subunit CDC26 TPR subdomain residues 229-431 (Pdb, 3hym) 66 .
Accession Codes 4c2m, 3tj1, 3nfi, 4bbr, 2oit, 3hym, 1ytb References 1 Knutson BA Hahn S TFIIB-related factors in RNA polymerase I transcription.
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