Primary Citation PubMed: 23612299
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Ligand binding and aggregation of pathogenic SOD1.
(2013) Nat Commun 4
PubMed: 23612299 | PubMedCentral: PMC3644087 | DOI: 10.1038/ncomms2750
Additional Information Accession codes : Atomic coordinates and structure factors for the crystal structures have been deposited in Protein Data Bank under accession numbers 4A7S, 4A7T, 4A7U and 4A7V ... 4A7T , 4A7U and 4A7V .
of atoms Protein 2,218 2,218 2,218 2,218 Water 463 356 283 243 Ligand 73 107 54 35 Average B-factors (Å2) Protein 9.7 11.2 14.7 16.8 Ligand 32.5 26.3 15.3 26.2 Water 37.2 25.3 24.7 27.3 RMS deviations Bond length (Å) 0.015 0.016 0.014 0.015 Bond angles ( o ) 1.717 1.620 1.711 1.728 PDB code 4A7S 4A7T 4A7U 4A7V Data collected from 5-fluorouridine, Isoproterenol, epinephrine and dopamine bound to I113T.
The high-resolution structure of cocrystals with I113T SOD1 (4A7T) displayed no indications of binding at the dimer interface site, but Isoproterenol was found in a hydrophilic pocket created by SOD1 loop II ( Fig. 5d–f , Supplementary Figs S7, S10, S11 and Table 1 ).
( d ) Isoproterenol with respect to the SOD1 dimer (4A7T) coloured as in a .
Publication Year: 2013
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